TBK1 antibody | knockout validation | Abcam ab40676

This is a knockout-validated antibody summary, based on the publications "The Golgi apparatus acts as a platform for TBK1 activation after viral RNA sensing", as cited below [1] and "The Cytoplasmic DNA Sensor cGAS Promotes Mitotic Cell Death" (see figure 2b, western blot) [2], the publication "Deletion of Tbk1 disrupts autophagy and reproduces behavioral and locomotor symptoms of FTD-ALS in mice" for western blot knockout validation (figure 1b) [3], "Priming Phosphorylation of TANK-Binding Kinase 1 by IκB Kinase β Is Essential in Toll-Like Receptor 3/4 Signaling" for western blot knockout validation (figure 3a) [4] and "A cell-free assay implicates a role of sphingomyelin and cholesterol in STING phosphorylation" for western blot knockout validation (figure 1a) [5]. Labome curates formal publications to compile a list of antibodies with unambiguous specificity within Validated Antibody Database (VAD).

TBK1 antibody | knockout validation | Abcam ab40676 figure 1
Figure 1. Immunoblotting analysis of TBK1–/– MEFs reconstituted with WT TBK1, TBK1K38M (K38M), or TBK1K30R/K401R (K30R/K401R). As controls, TBK1+/+ and TBK1–/– MEFs are shown. GAPDH was used as loading control. From [1].
Antibody information

Rabbit monoclonal IgG

Company: Abcam

Antibody: TBK1

Catalog number: ab40676

Summary: Rabbit monoclonal IgG against a peptide corresponding to human NAK/TBK1 (aa 1 to the C-terminus). Reacts with mouse, rat, and human. Suitable for western blot, immunocytochemistry/immunofluorescence, and immunohistochemistry (paraffin). Note: The antibody may not be suitable for IHC with mouse or rat samples.

Validation Method

Western blot | Immmunocytochemistry.

Knockout validation for immmunocytochemistry is based on the feedback from the authors. Fig 3 in [1] was based on the TBK1 antibody from Cayman Chemical Cat# 13929; the Authors indicated that Abcam ab40676 TBK1 antibody had the same result.

Sample

TBK1+/+ and TBK1–/– mouse embryonic fibroblasts reconstituted with WT and mutant TBK1 protein. Cells were lysed in lysis buffer (50 mM Tris-HCl pH 7.4, 150 mM NaCl, 1 % Triton X-100, 2 mM EDTA, 2 mM sodium pyrophosphate, 25 mM β-glycerophosphate, 1 mM sodium orthovanadate) supplemented with protease inhibitor cocktail (Thermo Scientific).

Primary incubation

1:5,000 dilution.

Detection

Chemiluminescence (Immobilon Western, Merck Millipore, Billerica, MA, USA).

References
  1. Pourcelot M, Zemirli N, Silva da Costa L, Loyant R, Garcin D, Vitour D, et al. The Golgi apparatus acts as a platform for TBK1 activation after viral RNA sensing. BMC Biol. 2016;14:69 pubmed publisher
  2. Zierhut C, Yamaguchi N, Paredes M, Luo J, Carroll T, Funabiki H. The Cytoplasmic DNA Sensor cGAS Promotes Mitotic Cell Death. Cell. 2019;178:302-315.e23 pubmed publisher
  3. Duan W, Guo M, Yi L, Zhang J, Bi Y, Liu Y, et al. Deletion of Tbk1 disrupts autophagy and reproduces behavioral and locomotor symptoms of FTD-ALS in mice. Aging (Albany NY). 2019;11:2457-2476 pubmed publisher
  4. Abe H, Satoh J, Shirasaka Y, Kogure A, Kato H, Ito S, et al. Priming Phosphorylation of TANK-Binding Kinase 1 by IκB Kinase β Is Essential in Toll-Like Receptor 3/4 Signaling. Mol Cell Biol. 2020;40: pubmed publisher
  5. Takahashi K, Niki T, Ogawa E, Fumika K, Nishioka Y, Sawa M, et al. A cell-free assay implicates a role of sphingomyelin and cholesterol in STING phosphorylation. Sci Rep. 2021;11:11996 pubmed publisher