SOX2 antibody | knockout validation | Abcam ab92494

This is a knockout-validated antibody summary, based on the publication "Distinct SoxB1 networks are required for naïve and primed pluripotency", as cited below [1]. Labome curates formal publications to compile a list of antibodies with unambiguous specificity within Validated Antibody Database (VAD).

SOX2 antibody | knockout validation | Abcam	 ab92494 figure 1
Figure 1. Immunoblot analysis of E14Tg2a, Sox2fl/- (SCKO) and Sox2-/- (SKO) epiblast stem cells (EpiSCs) showing that SOX2 protein (red) is reduced in SCKO and absent in SKO EpiSCs.
Antibody information

Rabbit monoclonal IgG

Company: Abcam

Antibody: SOX2

Catalog number: ab92494

Summary: Rabbit monoclonal IgG against a synthetic peptide within human SOX2. Reacts with mouse, human, Leucoraja erinacea. Suitable for western blot, immunohistochemistry (paraffin and whole mount), immunocytochemistry/immunofluorescence and ELISA. Unsuitable for flow cytometry or immunoprecipitation.

Validation Method

Western blot | Immunocytochemistry

SOX2 antibody | knockout validation | Abcam	 ab92494 figure 2
Figure 2. Immunofluorescence staining of SOX2 and OCT4 in SCKO and SKO6 EpiSCs. Scale bar, 100 mm. From [1].
Sample

E14Tg2a, Sox2fl/- and Sox2-/- epiblast stem cells (EpiSCs).

WB: Cells were lysed with lysis buffer comprising 50 mM Tris pH 8.0, 150 mM NaCl supplemented with fresh 0.5% NP-40, 0.5 mM DTT, 1 × protease inhibitors cocktail (Roche, Switzerland) and 1.3 μl of Benzonase (Novagen, Germany) (1 hr, 4°C).

IC: Cells were fixed with 4% PFA (10 mins, RT) and permeabilized using PBS/0.1% (v/v) Triton-X100 (PBSTr) for 10 mins, before quenching with 0.5M Glycine/PBSTr (15 mins).

Blocking agent

WB: 5% (w/v) low-fat milk in 0.01% (v/v) Tween-20/PBS (PBSTw).

IC: 3% (v/v) donkey serum/1% (v/v) BSA/PBST for 1 hr at RT.

Primary incubation

WB: 1:1,000 dilution in blocking solution.

IC: 1:400 dilution in blocking solution at 4°C overnight.

Secondary incubation

WB: 1:10,000 dilution donkey-raised secondary antibodies conjugated with IRDye 800CW (LI-COR 926–32213, Lincoln, USA).

IC: donkey-raised secondary antibodies conjugated with Alexa-488 in blocking solution for 1–2 hr at RT.

Detection

WB: Supersignal West Pico kit (Pierce, Cambridge, USA) and LI-COR Odyssey Fc imager.

IC: Olympus IX51 inverted fluorescent microscope.

References
  1. Corsinotti A, Wong F, Tatar T, Szczerbinska I, Halbritter F, Colby D, et al. Distinct SoxB1 networks are required for naïve and primed pluripotency. elife. 2017;6: pubmed publisher