IKKε antibody | knockout validation | Cell Signaling 3416

This is a knockout-validated antibody summary, based on the publications "Identification of TBK1 complexes required for the phosphorylation of IRF3 and the production of interferon β", as cited below [1], and "I-κB Kinase-ε Deficiency Attenuates the Development of Angiotensin II-Induced Myocardial Hypertrophy in Mice" for western blot knockout validation (figure 2a) [2]. Labome curates formal publications to compile a list of antibodies with unambiguous specificity within Validated Antibody Database (VAD).

IKKε antibody | knockout validation | Cell Signaling 3416 figure 1
Figure 1. BMDM from WT, IKKε KO, OPTN (D477N) and OPTN (D/N) × IKKε KO mice were stimulated with 10 mg/ml poly(I:C) for the times indicated. Aliquots of the cell extracts were subjected to SDS–PAGE and immunoblotted with antibodies that recognize IKKε. Antibodies to GAPDH were used as a loading control. From [1].
Antibody information

Rabbit monoclonal IgG

Company: Cell Signaling

Antibody: IKKε

Catalog number: 3416

Summary: Rabbit monoclonal IgG against a synthetic peptide corresponding to residues near the carboxyl terminus of mouse IKKε. Reacts with mouse and rat. Suitable for western blot, immunoprecipitation, immunofluorescence/immunocytochemistry and flow cytometry.

Validation Method

Western blot

Sample

Bone marrow-derived macrophages (BMDM) from WT and IKKε KO mice. Cells were rinsed in ice-cold PBS and extracted in ice-cold lysis buffer (50 mM Tris–HCl ( pH 7.5), 1 mM EGTA, 1 mM EDTA, 1% (v/v) Triton X-100, 1 mM sodium orthovanadate, 50 mM sodium fluoride, 5 mM sodium pyrophosphate, 0.27 M sucrose, 10 mM sodium 2-glycerophosphate, 1 mM phenylmethylsulfonyl fluoride, 1 mM benzamidine and 1 mM dithiothreitol).

Detection

ECL detection system (GE Healthcare).

Notes

TANK (Cat #2141), TRIF (Cat #4596) and TAK1 (TGFβ-activated kinase 1; Cat #4505) from Cell Signaling are also KO validated (Fig 2 and 5).

References
  1. Bakshi S, Taylor J, Strickson S, McCartney T, Cohen P. Identification of TBK1 complexes required for the phosphorylation of IRF3 and the production of interferon ?. Biochem J. 2017;474:1163-1174 pubmed publisher
  2. Cao Y, Li L, Liu Y, Chen G, Tao Z, Wang R, et al. I-κB Kinase-ε Deficiency Attenuates the Development of Angiotensin II-Induced Myocardial Hypertrophy in Mice. Oxid Med Cell Longev. 2021;2021:6429197 pubmed publisher