This is a Validated Antibody Database (VAD) review about thale cres.. AT4G40040, based on 37 published articles (read how Labome selects the articles), using AT4G40040 antibody in all methods. It is aimed to help Labome visitors find the most suited AT4G40040 antibody. Please note the number of articles fluctuates since newly identified citations are added and citations for discontinued catalog numbers are removed regularly.
AT4G40040 synonym: H3.3; T5J17.210; histone 3.3

Abcam
domestic rabbit polyclonal
  • immunohistochemistry - frozen section; mouse; loading ...; fig s2b
Abcam AT4G40040 antibody (Abcam, ab9045) was used in immunohistochemistry - frozen section on mouse samples (fig s2b). Stem Cell Reports (2020) ncbi
domestic rabbit polyclonal
  • chromatin immunoprecipitation; human; loading ...; fig 4a
Abcam AT4G40040 antibody (Abcam, ab9045) was used in chromatin immunoprecipitation on human samples (fig 4a). Nat Commun (2020) ncbi
domestic rabbit polyclonal
  • western blot; mouse; loading ...; fig 5a
Abcam AT4G40040 antibody (Abcam, ab9045) was used in western blot on mouse samples (fig 5a). Biochimie (2018) ncbi
mouse monoclonal (mAbcam1012)
  • immunoprecipitation; human; loading ...; fig 6b
Abcam AT4G40040 antibody (abcam, ab1012) was used in immunoprecipitation on human samples (fig 6b). Mol Cell Biol (2018) ncbi
domestic rabbit polyclonal
  • western blot; roundworm ; 1:1000; fig 6a
In order to find that JMJD-5 regulates lysine 36 of histone 3 di-methylation and is required at late stages of double strand break repair mediated by homologous recombination, Abcam AT4G40040 antibody (Abcam, ab9048) was used in western blot on roundworm samples at 1:1000 (fig 6a). PLoS Genet (2017) ncbi
domestic rabbit polyclonal
  • western blot; mouse; 1:2000; loading ...; fig s6c
Abcam AT4G40040 antibody (Abcam, Ab9045) was used in western blot on mouse samples at 1:2000 (fig s6c). Cell Rep (2017) ncbi
mouse monoclonal (mAbcam1012)
  • ChIP-Seq; mouse; loading ...; fig 5a
Abcam AT4G40040 antibody (Abcam, ab1012) was used in ChIP-Seq on mouse samples (fig 5a). Biochim Biophys Acta Gene Regul Mech (2017) ncbi
mouse monoclonal (mAbcam 6000)
  • western blot; human; loading ...; fig 3a
Abcam AT4G40040 antibody (Abcam, ab6000) was used in western blot on human samples (fig 3a). J Biol Chem (2017) ncbi
domestic rabbit polyclonal
  • western blot; rat; loading ...; fig s4a
Abcam AT4G40040 antibody (Abcam, ab9045) was used in western blot on rat samples (fig s4a). Proc Natl Acad Sci U S A (2016) ncbi
mouse monoclonal (mAbcam1012)
  • chromatin immunoprecipitation; mouse; fig 5c
Abcam AT4G40040 antibody (Abcam, ab1012) was used in chromatin immunoprecipitation on mouse samples (fig 5c). BMC Biol (2016) ncbi
mouse monoclonal (mAbcam1012)
  • chromatin immunoprecipitation; thale cress; fig 3
Abcam AT4G40040 antibody (Abcam, ab1012) was used in chromatin immunoprecipitation on thale cress samples (fig 3). Epigenetics Chromatin (2016) ncbi
mouse monoclonal (mAbcam1012)
  • chromatin immunoprecipitation; hamsters; fig 7
Abcam AT4G40040 antibody (Abcam, ab1012) was used in chromatin immunoprecipitation on hamsters samples (fig 7). BMC Biotechnol (2016) ncbi
domestic rabbit polyclonal
  • chromatin immunoprecipitation; Xenopus laevis; fig 5
Abcam AT4G40040 antibody (Abcam, ab9048) was used in chromatin immunoprecipitation on Xenopus laevis samples (fig 5). Cell Biosci (2016) ncbi
mouse monoclonal (mAbcam1012)
  • chromatin immunoprecipitation; Xenopus laevis; fig s2
Abcam AT4G40040 antibody (Abcam, ab1012) was used in chromatin immunoprecipitation on Xenopus laevis samples (fig s2). Cell Biosci (2016) ncbi
mouse monoclonal (mAbcam 6000)
  • immunocytochemistry; human; 1:1000; fig 5
Abcam AT4G40040 antibody (Abcam, ab6000) was used in immunocytochemistry on human samples at 1:1000 (fig 5). PLoS ONE (2015) ncbi
domestic rabbit polyclonal
  • western blot; human; 1:1000; loading ...; fig 1a
Abcam AT4G40040 antibody (Abcam, 9048) was used in western blot on human samples at 1:1000 (fig 1a). Oncotarget (2016) ncbi
mouse monoclonal (mAbcam1012)
  • ChIP-Seq; human; fig 2
  • immunocytochemistry; human; fig s2
Abcam AT4G40040 antibody (Abcam, ab1012) was used in ChIP-Seq on human samples (fig 2) and in immunocytochemistry on human samples (fig s2). Mol Cell Biol (2016) ncbi
mouse monoclonal (mAbcam1012)
  • western blot; human; fig s3
In order to discover tumour immunity and immunotherapy caused by epigenetic silencing of TH1-type chemokines, Abcam AT4G40040 antibody (Abcam, ab1012) was used in western blot on human samples (fig s3). Nature (2015) ncbi
mouse monoclonal (mAbcam1012)
  • western blot; human; fig s2
Abcam AT4G40040 antibody (Abcam, ab1012) was used in western blot on human samples (fig s2). Oncotarget (2015) ncbi
mouse monoclonal (mAbcam 6000)
  • western blot; human; tbl 3
Abcam AT4G40040 antibody (Abcam, ab6000) was used in western blot on human samples (tbl 3). elife (2015) ncbi
mouse monoclonal (mAbcam1012)
  • western blot; human
Abcam AT4G40040 antibody (Abcam, ab1012) was used in western blot on human samples . Int J Biochem Cell Biol (2015) ncbi
mouse monoclonal (mAbcam 6000)
  • chromatin immunoprecipitation; human; fig 5
Abcam AT4G40040 antibody (Abcam, ab6000) was used in chromatin immunoprecipitation on human samples (fig 5). Nat Commun (2015) ncbi
mouse monoclonal (mAbcam1012)
  • chromatin immunoprecipitation; mouse; loading ...; fig 1
Abcam AT4G40040 antibody (Abcam, ab1012) was used in chromatin immunoprecipitation on mouse samples (fig 1). Methods Enzymol (2015) ncbi
mouse monoclonal (mAbcam1012)
  • chromatin immunoprecipitation; mouse; fig 1, 2
  • western blot; mouse; fig 5
Abcam AT4G40040 antibody (Abcam, ab1012) was used in chromatin immunoprecipitation on mouse samples (fig 1, 2) and in western blot on mouse samples (fig 5). Biochim Biophys Acta (2015) ncbi
mouse monoclonal (mAbcam1012)
  • chromatin immunoprecipitation; zebrafish
In order to study the relationship between two neutrophil chemoattractants, DUOX1-derived hydrogen peroxide and CXCL8, Abcam AT4G40040 antibody (Abcam, ab1012) was used in chromatin immunoprecipitation on zebrafish samples . J Immunol (2015) ncbi
mouse monoclonal (mAbcam1012)
  • chromatin immunoprecipitation; human; fig 6
Abcam AT4G40040 antibody (Abcam, Ab1012) was used in chromatin immunoprecipitation on human samples (fig 6). Development (2015) ncbi
mouse monoclonal (mAbcam1012)
  • chromatin immunoprecipitation; mouse; fig 2
Abcam AT4G40040 antibody (Abcam, ab1012) was used in chromatin immunoprecipitation on mouse samples (fig 2). J Immunol (2015) ncbi
mouse monoclonal (mAbcam1012)
  • chromatin immunoprecipitation; human
Abcam AT4G40040 antibody (Abcam, ab1012) was used in chromatin immunoprecipitation on human samples . Nucleic Acids Res (2014) ncbi
mouse monoclonal (mAbcam1012)
  • immunocytochemistry; human; 1:25
Abcam AT4G40040 antibody (Abcam, Ab1012) was used in immunocytochemistry on human samples at 1:25. Cryobiology (2014) ncbi
mouse monoclonal (mAbcam1012)
  • ChIP-Seq; human; fig 1
  • chromatin immunoprecipitation; human; fig s3
Abcam AT4G40040 antibody (Abcam, ab1012) was used in ChIP-Seq on human samples (fig 1) and in chromatin immunoprecipitation on human samples (fig s3). Nat Med (2014) ncbi
mouse monoclonal (mAbcam1012)
  • ChIP-Seq; human
Abcam AT4G40040 antibody (Abcam, ab1012) was used in ChIP-Seq on human samples . Nucleic Acids Res (2014) ncbi
mouse monoclonal (mAbcam1012)
  • western blot; human
Abcam AT4G40040 antibody (Abcam, ab1012) was used in western blot on human samples . Oncogene (2015) ncbi
mouse monoclonal (mAbcam 6000)
  • ChIP-Seq; mouse; fig 4
Abcam AT4G40040 antibody (Abcam, ab6000) was used in ChIP-Seq on mouse samples (fig 4). Genes Dev (2014) ncbi
mouse monoclonal (mAbcam1012)
  • chromatin immunoprecipitation; mouse
Abcam AT4G40040 antibody (Abcam, ab1012) was used in chromatin immunoprecipitation on mouse samples . Gene (2014) ncbi
mouse monoclonal (mAbcam1012)
  • chromatin immunoprecipitation; mouse
Abcam AT4G40040 antibody (Abcam, ab1012) was used in chromatin immunoprecipitation on mouse samples . PLoS ONE (2014) ncbi
mouse monoclonal (mAbcam1012)
  • chromatin immunoprecipitation; Saccharomycetales; 20 ug
  • western blot; Saccharomycetales
Abcam AT4G40040 antibody (Abcam, ab1012) was used in chromatin immunoprecipitation on Saccharomycetales samples at 20 ug and in western blot on Saccharomycetales samples . Proc Natl Acad Sci U S A (2012) ncbi
mouse monoclonal (mAbcam1012)
  • chromatin immunoprecipitation; mouse
Abcam AT4G40040 antibody (Abcam, ab1012) was used in chromatin immunoprecipitation on mouse samples . PLoS ONE (2012) ncbi
mouse monoclonal (mAbcam 6000)
  • chromatin immunoprecipitation; human; 3-5 ug
Abcam AT4G40040 antibody (Abcam, 6000) was used in chromatin immunoprecipitation on human samples at 3-5 ug. Nucleic Acids Res (2006) ncbi
Articles Reviewed
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  2. Viscarra J, Wang Y, Nguyen H, Choi Y, Sul H. Histone demethylase JMJD1C is phosphorylated by mTOR to activate de novo lipogenesis. Nat Commun. 2020;11:796 pubmed publisher
  3. Bartova E, Lochmanová G, Legartova S, Suchankova J, Fedr R, Krejci J, et al. Irradiation by γ-rays reduces the level of H3S10 phosphorylation and weakens the G2 phase-dependent interaction between H3S10 phosphorylation and γH2AX. Biochimie. 2018;154:86-98 pubmed publisher
  4. Fujimoto M, Takii R, Katiyar A, Srivastava P, Nakai A. Poly(ADP-Ribose) Polymerase 1 Promotes the Human Heat Shock Response by Facilitating Heat Shock Transcription Factor 1 Binding to DNA. Mol Cell Biol. 2018;38: pubmed publisher
  5. Amendola P, Zaghet N, Ramalho J, Vilstrup Johansen J, Boxem M, Salcini A. JMJD-5/KDM8 regulates H3K36me2 and is required for late steps of homologous recombination and genome integrity. PLoS Genet. 2017;13:e1006632 pubmed publisher
  6. Li G, Ji T, Chen J, Fu Y, Hou L, Feng Y, et al. CRL4DCAF8 Ubiquitin Ligase Targets Histone H3K79 and Promotes H3K9 Methylation in the Liver. Cell Rep. 2017;18:1499-1511 pubmed publisher
  7. Wu H, Gordon J, Whitfield T, Tai P, Van Wijnen A, Stein J, et al. Chromatin dynamics regulate mesenchymal stem cell lineage specification and differentiation to osteogenesis. Biochim Biophys Acta Gene Regul Mech. 2017;1860:438-449 pubmed publisher
  8. Wheaton K, Sarkari F, Stanly Johns B, Davarinejad H, Egorova O, Kaustov L, et al. UbE2E1/UBCH6 Is a Critical in Vivo E2 for the PRC1-catalyzed Ubiquitination of H2A at Lys-119. J Biol Chem. 2017;292:2893-2902 pubmed publisher
  9. Chakraborty D, Cui W, Rosario G, Scott R, Dhakal P, Renaud S, et al. HIF-KDM3A-MMP12 regulatory circuit ensures trophoblast plasticity and placental adaptations to hypoxia. Proc Natl Acad Sci U S A. 2016;113:E7212-E7221 pubmed
  10. Qiu Z, Elsayed Z, Peterkin V, Alkatib S, Bennett D, Landry J. Ino80 is essential for proximal-distal axis asymmetry in part by regulating Bmp4 expression. BMC Biol. 2016;14:18 pubmed publisher
  11. Liu N, Avramova Z. Molecular mechanism of the priming by jasmonic acid of specific dehydration stress response genes in Arabidopsis. Epigenetics Chromatin. 2016;9:8 pubmed publisher
  12. Veith N, Ziehr H, MacLeod R, Reamon Buettner S. Mechanisms underlying epigenetic and transcriptional heterogeneity in Chinese hamster ovary (CHO) cell lines. BMC Biotechnol. 2016;16:6 pubmed publisher
  13. Tamaoki K, Okada R, Ishihara A, Shiojiri N, Mochizuki K, Goda T, et al. Morphological, biochemical, transcriptional and epigenetic responses to fasting and refeeding in intestine of Xenopus laevis. Cell Biosci. 2016;6:2 pubmed publisher
  14. García Castro I, Garcia Lopez G, Avila González D, Flores Herrera H, Molina Hernández A, Portillo W, et al. Markers of Pluripotency in Human Amniotic Epithelial Cells and Their Differentiation to Progenitor of Cortical Neurons. PLoS ONE. 2015;10:e0146082 pubmed publisher
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  16. Grandy R, Whitfield T, Wu H, Fitzgerald M, VanOudenhove J, Zaidi S, et al. Genome-Wide Studies Reveal that H3K4me3 Modification in Bivalent Genes Is Dynamically Regulated during the Pluripotent Cell Cycle and Stabilized upon Differentiation. Mol Cell Biol. 2016;36:615-27 pubmed publisher
  17. Peng D, Kryczek I, Nagarsheth N, Zhao L, Wei S, Wang W, et al. Epigenetic silencing of TH1-type chemokines shapes tumour immunity and immunotherapy. Nature. 2015;527:249-53 pubmed publisher
  18. Lu S, Yang Y, Du Y, Cao L, Li M, Shen C, et al. The transcription factor c-Fos coordinates with histone lysine-specific demethylase 2A to activate the expression of cyclooxygenase-2. Oncotarget. 2015;6:34704-17 pubmed publisher
  19. Evans B, Griner E. Registered report: Oncometabolite 2-hydroxyglutarate is a competitive inhibitor of α-ketoglutarate-dependent dioxygenases. elife. 2015;4:e07420 pubmed publisher
  20. Gunes A, Iscan E, Topel H, Avci S, Gumustekin M, Erdal E, et al. Heparin treatment increases thioredoxin interacting protein expression in hepatocellular carcinoma cells. Int J Biochem Cell Biol. 2015;65:169-81 pubmed publisher
  21. Spurlock C, Tossberg J, Guo Y, Collier S, Crooke P, Aune T. Expression and functions of long noncoding RNAs during human T helper cell differentiation. Nat Commun. 2015;6:6932 pubmed publisher
  22. Takahashi J, Kumar V, Nakashe P, Koike N, Huang H, Green C, et al. ChIP-seq and RNA-seq methods to study circadian control of transcription in mammals. Methods Enzymol. 2015;551:285-321 pubmed publisher
  23. Wijeweera A, Haj M, Feldman A, Pnueli L, Luo Z, Melamed P. Gonadotropin gene transcription is activated by menin-mediated effects on the chromatin. Biochim Biophys Acta. 2015;1849:328-41 pubmed publisher
  24. de Oliveira S, Boudinot P, Calado Ã, Mulero V. Duox1-derived H2O2 modulates Cxcl8 expression and neutrophil recruitment via JNK/c-JUN/AP-1 signaling and chromatin modifications. J Immunol. 2015;194:1523-33 pubmed publisher
  25. Karamitros D, Patmanidi A, Kotantaki P, Potocnik A, Bähr Ivacevic T, Benes V, et al. Geminin deletion increases the number of fetal hematopoietic stem cells by affecting the expression of key transcription factors. Development. 2015;142:70-81 pubmed publisher
  26. Naik A, Hawwari A, Krangel M. Specification of Vδ and Vα usage by Tcra/Tcrd locus V gene segment promoters. J Immunol. 2015;194:790-4 pubmed publisher
  27. Suzuki A, Makinoshima H, Wakaguri H, Esumi H, Sugano S, Kohno T, et al. Aberrant transcriptional regulations in cancers: genome, transcriptome and epigenome analysis of lung adenocarcinoma cell lines. Nucleic Acids Res. 2014;42:13557-72 pubmed publisher
  28. Bakhtari A, Rahmani H, Bonakdar E, Jafarpour F, Asgari V, Hosseini S, et al. The interfering effects of superovulation and vitrification upon some important epigenetic biomarkers in mouse blastocyst. Cryobiology. 2014;69:419-27 pubmed publisher
  29. Herranz D, Ambesi Impiombato A, Palomero T, Schnell S, Belver L, Wendorff A, et al. A NOTCH1-driven MYC enhancer promotes T cell development, transformation and acute lymphoblastic leukemia. Nat Med. 2014;20:1130-7 pubmed publisher
  30. Matsumoto K, Suzuki A, Wakaguri H, Sugano S, Suzuki Y. Construction of mate pair full-length cDNAs libraries and characterization of transcriptional start sites and termination sites. Nucleic Acids Res. 2014;42:e125 pubmed publisher
  31. Mungamuri S, Wang S, Manfredi J, Gu W, Aaronson S. Ash2L enables P53-dependent apoptosis by favoring stable transcription pre-initiation complex formation on its pro-apoptotic target promoters. Oncogene. 2015;34:2461-70 pubmed publisher
  32. Pezic D, Manakov S, Sachidanandam R, Aravin A. piRNA pathway targets active LINE1 elements to establish the repressive H3K9me3 mark in germ cells. Genes Dev. 2014;28:1410-28 pubmed publisher
  33. Tai P, Wu H, Gordon J, Whitfield T, Barutcu A, Van Wijnen A, et al. Epigenetic landscape during osteoblastogenesis defines a differentiation-dependent Runx2 promoter region. Gene. 2014;550:1-9 pubmed publisher
  34. Seki M, Masaki H, Arauchi T, Nakauchi H, Sugano S, Suzuki Y. A comparison of the rest complex binding patterns in embryonic stem cells and epiblast stem cells. PLoS ONE. 2014;9:e95374 pubmed publisher
  35. Maltby V, Martin B, Brind Amour J, Chruscicki A, McBurney K, Schulze J, et al. Histone H3K4 demethylation is negatively regulated by histone H3 acetylation in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A. 2012;109:18505-10 pubmed publisher
  36. Makeyev A, Enkhmandakh B, Hong S, Joshi P, Shin D, Bayarsaihan D. Diversity and complexity in chromatin recognition by TFII-I transcription factors in pluripotent embryonic stem cells and embryonic tissues. PLoS ONE. 2012;7:e44443 pubmed publisher
  37. Donati G, Imbriano C, Mantovani R. Dynamic recruitment of transcription factors and epigenetic changes on the ER stress response gene promoters. Nucleic Acids Res. 2006;34:3116-27 pubmed