This is a Validated Antibody Database (VAD) review about rat Ctcf, based on 15 published articles (read how Labome selects the articles), using Ctcf antibody in all methods. It is aimed to help Labome visitors find the most suited Ctcf antibody. Please note the number of articles fluctuates since newly identified citations are added and citations for discontinued catalog numbers are removed regularly.
Santa Cruz Biotechnology
mouse monoclonal (B-5)
  • western blot; mouse; loading ...; fig 4c
Santa Cruz Biotechnology Ctcf antibody (Santa, sc-271514) was used in western blot on mouse samples (fig 4c). Nat Commun (2021) ncbi
mouse monoclonal (G-8)
  • western blot; mouse; loading ...; fig 4c
Santa Cruz Biotechnology Ctcf antibody (Santa Cruz, sc-271474) was used in western blot on mouse samples (fig 4c). Fluids Barriers CNS (2020) ncbi
Abcam
domestic rabbit monoclonal (EPR18253)
  • immunocytochemistry; mouse; 1:1000; loading ...; fig s5b
Abcam Ctcf antibody (Abcam, ab188408) was used in immunocytochemistry on mouse samples at 1:1000 (fig s5b). Nat Commun (2021) ncbi
domestic rabbit monoclonal (EPR7314(B))
  • western blot; mouse; 1:500; fig 4
Abcam Ctcf antibody (Abcam, ab128873) was used in western blot on mouse samples at 1:500 (fig 4). J Cell Biol (2015) ncbi
Cell Signaling Technology
domestic rabbit polyclonal
  • ChIP-Seq; mouse; loading ...; fig 1c
  • immunoprecipitation; mouse; loading ...; fig 1b
  • western blot; mouse; loading ...; fig 1b
Cell Signaling Technology Ctcf antibody (Cell Signaling, 2899) was used in ChIP-Seq on mouse samples (fig 1c), in immunoprecipitation on mouse samples (fig 1b) and in western blot on mouse samples (fig 1b). Cell (2019) ncbi
domestic rabbit monoclonal (D31H2)
  • western blot; mouse; loading ...; fig 6i
Cell Signaling Technology Ctcf antibody (Cell Signaling, 3418) was used in western blot on mouse samples (fig 6i). Dev Biol (2019) ncbi
domestic rabbit monoclonal (D31H2)
  • ChIP-Seq; mouse; loading ...; fig 4c
  • immunocytochemistry; mouse; loading ...; fig 3c
  • western blot; mouse; loading ...; fig 1c
  • immunocytochemistry; human; loading ...; fig 2e
Cell Signaling Technology Ctcf antibody (Cell Signaling, 3418) was used in ChIP-Seq on mouse samples (fig 4c), in immunocytochemistry on mouse samples (fig 3c), in western blot on mouse samples (fig 1c) and in immunocytochemistry on human samples (fig 2e). elife (2019) ncbi
domestic rabbit monoclonal (D31H2)
  • western blot; chicken; loading ...; fig s14a
Cell Signaling Technology Ctcf antibody (Cell Signaling, 3418S) was used in western blot on chicken samples (fig s14a). Nucleic Acids Res (2019) ncbi
domestic rabbit monoclonal (D31H2)
  • western blot; human; 1:700; loading ...; fig s8a
In order to identify the elementary structural units of the DNA damage response, Cell Signaling Technology Ctcf antibody (Cell Signaling, D31H2) was used in western blot on human samples at 1:700 (fig s8a). Nat Commun (2017) ncbi
domestic rabbit monoclonal (D31H2)
  • RNA immunoprecipitation; human; fig 3
Cell Signaling Technology Ctcf antibody (Cell Signaling, 3418S) was used in RNA immunoprecipitation on human samples (fig 3). Genome Biol (2016) ncbi
domestic rabbit monoclonal (D31H2)
  • western blot; human; 1:1000; fig 3
Cell Signaling Technology Ctcf antibody (Cell Signaling Technology, 3418) was used in western blot on human samples at 1:1000 (fig 3). PLoS ONE (2016) ncbi
domestic rabbit monoclonal (D31H2)
  • chromatin immunoprecipitation; human; fig 3
Cell Signaling Technology Ctcf antibody (Cell Signaling, 3418) was used in chromatin immunoprecipitation on human samples (fig 3). Nature (2016) ncbi
BD Biosciences
mouse monoclonal (48/CTCF)
  • immunocytochemistry; rat; loading ...; fig 3a
BD Biosciences Ctcf antibody (Cell Signaling Technology, 612148) was used in immunocytochemistry on rat samples (fig 3a). elife (2020) ncbi
mouse monoclonal (48/CTCF)
  • immunocytochemistry; human; 1:50; fig 7
  • western blot; human; fig 9
BD Biosciences Ctcf antibody (BD, 612149) was used in immunocytochemistry on human samples at 1:50 (fig 7) and in western blot on human samples (fig 9). PLoS Pathog (2015) ncbi
mouse monoclonal (48/CTCF)
  • immunocytochemistry; human
BD Biosciences Ctcf antibody (BD, 612149) was used in immunocytochemistry on human samples . PLoS Genet (2014) ncbi
Articles Reviewed
  1. Olbrich T, Vega Sendino M, Tillo D, Wu W, Zolnerowich N, Pavani R, et al. CTCF is a barrier for 2C-like reprogramming. Nat Commun. 2021;12:4856 pubmed publisher
  2. Rivero Hinojosa S, Pugacheva E, Kang S, Mendez Catala C, Kovalchuk A, Strunnikov A, et al. The combined action of CTCF and its testis-specific paralog BORIS is essential for spermatogenesis. Nat Commun. 2021;12:3846 pubmed publisher
  3. López Soto E, Lipscombe D. Cell-specific exon methylation and CTCF binding in neurons regulate calcium ion channel splicing and function. elife. 2020;9: pubmed publisher
  4. Christensen I, Wu Q, Bohlbro A, Skals M, Damkier H, Hübner C, et al. Genetic disruption of slc4a10 alters the capacity for cellular metabolism and vectorial ion transport in the choroid plexus epithelium. Fluids Barriers CNS. 2020;17:2 pubmed publisher
  5. Kaaij L, Mohn F, van der Weide R, de Wit E, B hler M. The ChAHP Complex Counteracts Chromatin Looping at CTCF Sites that Emerged from SINE Expansions in Mouse. Cell. 2019;178:1437-1451.e14 pubmed publisher
  6. Rajderkar S, Mann J, Panaretos C, Yumoto K, Li H, Mishina Y, et al. Trim33 is required for appropriate development of pre-cardiogenic mesoderm. Dev Biol. 2019;450:101-114 pubmed publisher
  7. Del Rosario B, Kriz A, Del Rosario A, Anselmo A, Fry C, White F, et al. Exploration of CTCF post-translation modifications uncovers Serine-224 phosphorylation by PLK1 at pericentric regions during the G2/M transition. elife. 2019;8: pubmed publisher
  8. Fishman V, Battulin N, Nuriddinov M, Maslova A, Zlotina A, Strunov A, et al. 3D organization of chicken genome demonstrates evolutionary conservation of topologically associated domains and highlights unique architecture of erythrocytes' chromatin. Nucleic Acids Res. 2019;47:648-665 pubmed publisher
  9. Natale F, Rapp A, Yu W, Maiser A, Harz H, Scholl A, et al. Identification of the elementary structural units of the DNA damage response. Nat Commun. 2017;8:15760 pubmed publisher
  10. G Hendrickson D, Kelley D, Tenen D, BERNSTEIN B, Rinn J. Widespread RNA binding by chromatin-associated proteins. Genome Biol. 2016;17:28 pubmed publisher
  11. Pchelintsev N, Adams P, Nelson D. Critical Parameters for Efficient Sonication and Improved Chromatin Immunoprecipitation of High Molecular Weight Proteins. PLoS ONE. 2016;11:e0148023 pubmed publisher
  12. Flavahan W, Drier Y, Liau B, Gillespie S, Venteicher A, Stemmer Rachamimov A, et al. Insulator dysfunction and oncogene activation in IDH mutant gliomas. Nature. 2016;529:110-4 pubmed publisher
  13. Mehta K, Gunasekharan V, Satsuka A, Laimins L. Human papillomaviruses activate and recruit SMC1 cohesin proteins for the differentiation-dependent life cycle through association with CTCF insulators. PLoS Pathog. 2015;11:e1004763 pubmed publisher
  14. Harr J, Luperchio T, Wong X, Cohen E, Wheelan S, Reddy K. Directed targeting of chromatin to the nuclear lamina is mediated by chromatin state and A-type lamins. J Cell Biol. 2015;208:33-52 pubmed publisher
  15. Zuin J, Franke V, van Ijcken W, van der Sloot A, Krantz I, van der Reijden M, et al. A cohesin-independent role for NIPBL at promoters provides insights in CdLS. PLoS Genet. 2014;10:e1004153 pubmed publisher