| Published Application/Species/Sample/Dilution | Reference | 
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| immunohistochemistry; human; 1:600; fig 2a
 | Sarvestani S, SIGNS S, Hu B, Yeu Y, Feng H, Ni Y, et al . Induced organoids derived from patients with ulcerative colitis recapitulate colitic reactivity. Nat Commun. 2021;12:262 pubmed  publisher | 
|  | Rosli S, Harpur C, Lam M, West A, Hodges C, Mansell A, et al . Gasdermin D promotes hyperinflammation and immunopathology during severe influenza A virus infection. Cell Death Dis. 2023;14:727 pubmed  publisher | 
|  | Rochman M, Rochman Y, Caldwell J, Mack L, Besse J, Manes N, et al . The minichromosome maintenance complex drives esophageal basal zone hyperplasia. JCI Insight. 2023;8: pubmed  publisher | 
|  | Shimodaira Y, More S, Hamade H, Blackwood A, Abraham J, Thomas L, et al . DR3 Regulates Intestinal Epithelial Homeostasis and Regeneration After Intestinal Barrier Injury. Cell Mol Gastroenterol Hepatol. 2023;16:83-105 pubmed  publisher | 
|  | Ranaei Pirmardan E, Zhang Y, Barakat A, Naseri M, Russmann C, Hafezi Moghadam A. Pre-hyperglycemia immune cell trafficking underlies subclinical diabetic cataractogenesis. J Biomed Sci. 2023;30:6 pubmed  publisher | 
|  | Olmsted Z, Paredes Espinosa M, Paluh J. Generation of human elongating multi-lineage organized cardiac gastruloids. STAR Protoc. 2022;3:101898 pubmed  publisher | 
|  | Nakashima Y, Miyagi Shiohira C, Saitoh I, Watanabe M, Matsushita M, Tsukahara M, et al . Induced hepatic stem cells are suitable for human hepatocyte production. iScience. 2022;25:105052 pubmed  publisher | 
|  | Tan Y, Flynn W, Sivajothi S, Luo D, Bozal S, Dav xe9 M, et al . Single-cell analysis of endometriosis reveals a coordinated transcriptional programme driving immunotolerance and angiogenesis across eutopic and ectopic tissues. Nat Cell Biol. 2022;24:1306-1318 pubmed  publisher | 
|  | Westerling Bui A, Fast E, Soare T, Venkatachalan S, DeRan M, Fanelli A, et al . Transplanted organoids empower human preclinical assessment of drug candidate for the clinic. Sci Adv. 2022;8:eabj5633 pubmed  publisher | 
|  | Hamade H, Stamps J, Stamps D, More S, Thomas L, Blackwood A, et al . BATF3 Protects Against Metabolic Syndrome and Maintains Intestinal Epithelial Homeostasis. Front Immunol. 2022;13:841065 pubmed  publisher | 
|  | Olmsted Z, Paluh J. A combined human gastruloid model of cardiogenesis and neurogenesis. iScience. 2022;25:104486 pubmed  publisher | 
|  | Koide T, Koyanagi Aoi M, Uehara K, Kakeji Y, Aoi T. CDX2-induced intestinal metaplasia in human gastric organoids derived from induced pluripotent stem cells. iScience. 2022;25:104314 pubmed  publisher | 
|  | Hong Y, Shan S, Gu Y, Huang H, Zhang Q, Han Y, et al . Malfunction of airway basal stem cells plays a crucial role in pathophysiology of tracheobronchopathia osteoplastica. Nat Commun. 2022;13:1309 pubmed  publisher | 
|  | Kiss E, Forika G, Dank M, Krenacs T, Nemeth Z. Methyl Donors Reduce Cell Proliferation by Diminishing Erk-Signaling and NFkB Levels, While Increasing E-Cadherin Expression in Panc-1 Cell Line. Int J Mol Sci. 2022;23: pubmed  publisher | 
|  | Uehara K, Koyanagi Aoi M, Koide T, Itoh T, Aoi T. Epithelial-derived factors induce muscularis mucosa of human induced pluripotent stem cell-derived gastric organoids. Stem Cell Reports. 2022;17:820-834 pubmed  publisher | 
|  | Estrada H, Patel S, RABIZADEH S, Casero D, Targan S, Barrett R. Development of a Personalized Intestinal Fibrosis Model Using Human Intestinal Organoids Derived From Induced Pluripotent Stem Cells. Inflamm Bowel Dis. 2022;28:667-679 pubmed  publisher | 
|  | Eicher A, Kechele D, Sundaram N, Berns H, Poling H, Haines L, et al . Functional human gastrointestinal organoids can be engineered from three primary germ layers derived separately from pluripotent stem cells. Cell Stem Cell. 2022;29:36-51.e6 pubmed  publisher | 
|  | Yucer N, Ahdoot R, Workman M, Laperle A, Recouvreux M, Kurowski K, et al . Human iPSC-derived fallopian tube organoids with BRCA1 mutation recapitulate early-stage carcinogenesis. Cell Rep. 2021;37:110146 pubmed  publisher | 
|  | Ruiz Torres S, Lambert P, Wikenheiser Brokamp K, Wells S. Directed differentiation of human pluripotent stem cells into epidermal stem and progenitor cells. Mol Biol Rep. 2021;48:6213-6222 pubmed  publisher | 
|  | Bedard M, de Alarcon A, Kou Y, Lee D, Sestito A, Duggins A, et al . HPV Strain Predicts Severity of Juvenile-Onset Recurrent Respiratory Papillomatosis with Implications for Disease Screening. Cancers (Basel). 2021;13: pubmed  publisher | 
|  | Zhang Y, Devocelle A, Desterke C, de Souza L, Hadadi x, Acloque H, et al . BMAL1 Knockdown Leans Epithelial-Mesenchymal Balance toward Epithelial Properties and Decreases the Chemoresistance of Colon Carcinoma Cells. Int J Mol Sci. 2021;22: pubmed  publisher | 
|  | Zolghadr F, Tse N, Loka D, Joun G, Meppat S, Wan V, et al . A Wnt-mediated phenotype switch along the epithelial-mesenchymal axis defines resistance and invasion downstream of ionising radiation in oral squamous cell carcinoma. Br J Cancer. 2021;124:1921-1933 pubmed  publisher | 
|  | Koike H, Iwasawa K, Ouchi R, Maezawa M, Kimura M, Kodaka A, et al . Engineering human hepato-biliary-pancreatic organoids from pluripotent stem cells. Nat Protoc. 2021;16:919-936 pubmed  publisher | 
|  | Bedard M, Brusadelli M, Carlile A, Ruiz Torres S, Lodin H, Lee D, et al . Patient-Derived Organotypic Epithelial Rafts Model Phenotypes in Juvenile-Onset Recurrent Respiratory Papillomatosis. Viruses. 2021;13: pubmed  publisher | 
|  | Workman M, Troisi E, Targan S, Svendsen C, Barrett R. Modeling Intestinal Epithelial Response to Interferon-γ in Induced Pluripotent Stem Cell-Derived Human Intestinal Organoids. Int J Mol Sci. 2020;22: pubmed  publisher | 
|  | Janssen A, Duivenvoorde L, Rijkers D, Nijssen R, Peijnenburg A, Van Der Zande M, et al . Cytochrome P450 expression, induction and activity in human induced pluripotent stem cell-derived intestinal organoids and comparison with primary human intestinal epithelial cells and Caco-2 cells. Arch Toxicol. 2021;95:907-922 pubmed  publisher | 
|  | Chen L, Dalton S. Multipotent Vascular Progenitor Cells of the Mesothelium Lineage Generated from Human Pluripotent Stem Cells. STAR Protoc. 2020;1:100031 pubmed  publisher | 
|  | Soleimany A, Kirkpatrick J, Su S, Dudani J, Zhong Q, Bekdemir A, et al . Activatable Zymography Probes Enable In Situ Localization of Protease Dysregulation in Cancer. Cancer Res. 2021;81:213-224 pubmed  publisher | 
|  | Caron T, Scott K, Sinha N, Muthupalani S, Baqai M, Ang L, et al . Claudin-18 Loss Alters Transcellular Chloride Flux but not Tight Junction Ion Selectivity in Gastric Epithelial Cells. Cell Mol Gastroenterol Hepatol. 2021;11:783-801 pubmed  publisher | 
|  | Liu J, Pan T, Chen Y, Liu Y, Yang F, Chen Q, et al . Repair of acute liver damage with immune evasive hESC derived hepato-blasts. Stem Cell Res. 2020;49:102010 pubmed  publisher | 
|  | Alexander K, Serrano C, Chakraborty A, Nearing M, Council L, Riquelme A, et al . Modulation of glycosyltransferase ST6Gal-I in gastric cancer-derived organoids disrupts homeostatic epithelial cell turnover. J Biol Chem. 2020;295:14153-14163 pubmed  publisher | 
|  | Dabelsteen S, Pallesen E, Marinova I, Nielsen M, Adamopoulou M, Rømer T, et al . Essential Functions of Glycans in Human Epithelia Dissected by a CRISPR-Cas9-Engineered Human Organotypic Skin Model. Dev Cell. 2020;54:669-684.e7 pubmed  publisher | 
|  | Dias A, Lozovska A, Wymeersch F, Novoa A, Binagui Casas A, Sobral D, et al . A Tgfbr1/Snai1-dependent developmental module at the core of vertebrate axial elongation. elife. 2020;9: pubmed  publisher | 
|  | Thompson W, Takebe T. Generation of multi-cellular human liver organoids from pluripotent stem cells. Methods Cell Biol. 2020;159:47-68 pubmed  publisher | 
|  | Daoud A, Múnera J. Generation of human colonic organoids from human pluripotent stem cells. Methods Cell Biol. 2020;159:201-227 pubmed  publisher | 
|  | Koterazawa Y, Koyanagi Aoi M, Uehara K, Kakeji Y, Aoi T. Retinoic acid receptor γ activation promotes differentiation of human induced pluripotent stem cells into esophageal epithelium. J Gastroenterol. 2020;55:763-774 pubmed  publisher | 
|  | Lakshmi Narayan P, Kajon A. Human mastadenovirus-B (HAdV-B)-specific E3-CR1β and E3-CR1γ glycoproteins interact with each other and localize at the plasma membrane of non-polarized airway epithelial cells. Virology. 2020;546:67-78 pubmed  publisher | 
|  | Rao W, Wang S, Duleba M, Niroula S, Goller K, Xie J, et al . Regenerative Metaplastic Clones in COPD Lung Drive Inflammation and Fibrosis. Cell. 2020;181:848-864.e18 pubmed  publisher | 
|  | Cui W, Sathyanarayan A, Lopresti M, Aghajan M, Chen C, Mashek D. Lipophagy-derived fatty acids undergo extracellular efflux via lysosomal exocytosis. Autophagy. 2020;:1-16 pubmed  publisher | 
|  | Kline K, Lian H, Zhong X, Luo X, Winston J, Cong Y, et al . Neonatal Injury Increases Gut Permeability by Epigenetically Suppressing E-Cadherin in Adulthood. J Immunol. 2020;204:980-989 pubmed  publisher | 
|  | Praveschotinunt P, Duraj Thatte A, Gelfat I, Bahl F, Chou D, Joshi N. Engineered E. coli Nissle 1917 for the delivery of matrix-tethered therapeutic domains to the gut. Nat Commun. 2019;10:5580 pubmed  publisher | 
|  | Graf K, Last A, Gratz R, Allert S, Linde S, Westermann M, et al . Keeping Candida commensal: how lactobacilli antagonize pathogenicity of Candida albicans in an in vitro gut model. Dis Model Mech. 2019;12: pubmed  publisher | 
|  | Devocelle A, Lecru L, Francois H, Desterke C, Gallerne C, Eid P, et al . Inhibition of TGF-β1 Signaling by IL-15: A Novel Role for IL-15 in the Control of Renal Epithelial-Mesenchymal Transition: IL-15 Counteracts TGF-β1-Induced EMT in Renal Fibrosis. Int J Cell Biol. 2019;2019:9151394 pubmed  publisher | 
|  | Kiener M, Chen L, Krebs M, Grosjean J, Klima I, Kalogirou C, et al . miR-221-5p regulates proliferation and migration in human prostate cancer cells and reduces tumor growth in vivo. BMC Cancer. 2019;19:627 pubmed  publisher | 
|  | Colunga T, Hayworth M, Kreß S, Reynolds D, Chen L, Nazor K, et al . Human Pluripotent Stem Cell-Derived Multipotent Vascular Progenitors of the Mesothelium Lineage Have Utility in Tissue Engineering and Repair. Cell Rep. 2019;26:2566-2579.e10 pubmed  publisher | 
|  | Steele N, Chakrabarti J, Wang J, Biesiada J, Holokai L, Chang J, et al . An Organoid-Based Preclinical Model of Human Gastric Cancer. Cell Mol Gastroenterol Hepatol. 2019;7:161-184 pubmed  publisher | 
|  | Bajaj P, Rodrigues A, Steppan C, Engle S, Mathialagan S, Schroeter T. Human Pluripotent Stem Cell-Derived Kidney Model for Nephrotoxicity Studies. Drug Metab Dispos. 2018;46:1703-1711 pubmed  publisher | 
|  | Topal T, Hong X, Xue X, Fan Z, Kanetkar N, Nguyen J, et al . Acoustic Tweezing Cytometry Induces Rapid Initiation of Human Embryonic Stem Cell Differentiation. Sci Rep. 2018;8:12977 pubmed  publisher | 
|  | Workman M, Gleeson J, Troisi E, Estrada H, Kerns S, HINOJOSA C, et al . Enhanced Utilization of Induced Pluripotent Stem Cell-Derived Human Intestinal Organoids Using Microengineered Chips. Cell Mol Gastroenterol Hepatol. 2018;5:669-677.e2 pubmed  publisher | 
|  | Merdrignac A, Angenard G, Allain C, Petitjean K, Bergeat D, Bellaud P, et al . A novel transforming growth factor beta-induced long noncoding RNA promotes an inflammatory microenvironment in human intrahepatic cholangiocarcinoma. Hepatol Commun. 2018;2:254-269 pubmed  publisher | 
|  | Riva L, Song O, Prentoe J, Helle F, L homme L, Gattolliat C, et al . Identification of Piperazinylbenzenesulfonamides as New Inhibitors of Claudin-1 Trafficking and Hepatitis C Virus Entry. J Virol. 2018;92: pubmed  publisher | 
|  | Yang L, Zha T, He X, Chen L, Zhu Q, Wu W, et al . Placenta-specific protein 1 promotes cell proliferation and invasion in non-small cell lung cancer. Oncol Rep. 2018;39:53-60 pubmed  publisher | 
|  | Yucer N, Holzapfel M, Jenkins Vogel T, Lenaeus L, Ornelas L, Laury A, et al . Directed Differentiation of Human Induced Pluripotent Stem Cells into Fallopian Tube Epithelium. Sci Rep. 2017;7:10741 pubmed  publisher | 
|  | Daugaard I, Sanders K, Idica A, Vittayarukskul K, Hamdorf M, Krog J, et al . miR-151a induces partial EMT by regulating E-cadherin in NSCLC cells. Oncogenesis. 2017;6:e366 pubmed  publisher | 
|  | Abagnale G, Sechi A, Steger M, Zhou Q, Kuo C, Aydin G, et al . Surface Topography Guides Morphology and Spatial Patterning of Induced Pluripotent Stem Cell Colonies. Stem Cell Reports. 2017;9:654-666 pubmed  publisher | 
|  | Treerat P, Prince O, Cruz Lagunas A, Muñoz Torrico M, Salazar Lezama M, Selman M, et al . Novel role for IL-22 in protection during chronic Mycobacterium tuberculosis HN878 infection. Mucosal Immunol. 2017;10:1069-1081 pubmed  publisher | 
|  | Arora N, Imran Alsous J, Guggenheim J, Mak M, Múnera J, Wells J, et al . A process engineering approach to increase organoid yield. Development. 2017;144:1128-1136 pubmed  publisher | 
|  | McCracken K, Aihara E, Martin B, Crawford C, Broda T, Treguier J, et al . Wnt/β-catenin promotes gastric fundus specification in mice and humans. Nature. 2017;541:182-187 pubmed  publisher |