| Published Application/Species/Sample/Dilution | Reference |
|---|
- immunohistochemistry; thale cress; fig 2e
| Yuan W, Zhou J, Tong J, Zhuo W, Wang L, Li Y, et al. ALBA protein complex reads genic R-loops to maintain genome stability in Arabidopsis. Sci Adv. 2019;5:eaav9040 pubmed publisher |
- immunoprecipitation; human; loading ...; fig 6b
| Fujimoto M, Takii R, Katiyar A, Srivastava P, Nakai A. Poly(ADP-Ribose) Polymerase 1 Promotes the Human Heat Shock Response by Facilitating Heat Shock Transcription Factor 1 Binding to DNA. Mol Cell Biol. 2018;38: pubmed publisher |
- ChIP-Seq; mouse; loading ...; fig s3e
| Busslinger G, Stocsits R, van der Lelij P, Axelsson E, Tedeschi A, Galjart N, et al. Cohesin is positioned in mammalian genomes by transcription, CTCF and Wapl. Nature. 2017;544:503-507 pubmed publisher |
- chromatin immunoprecipitation; human; loading ...; fig 4b
| Hu T, Zhu X, Pi W, Yu M, Shi H, Tuan D. Hypermethylated LTR retrotransposon exhibits enhancer activity. Epigenetics. 2017;12:226-237 pubmed publisher |
- western blot; brewer's yeast; 1:5000; loading ...; fig s1e
| Young C, Hillyer C, Hokamp K, Fitzpatrick D, Konstantinov N, Welty J, et al. Distinct histone methylation and transcription profiles are established during the development of cellular quiescence in yeast. BMC Genomics. 2017;18:107 pubmed publisher |
- western blot; human; loading ...; fig 4a
| Jin X, Wu N, Dai J, Li Q, Xiao X. TXNIP mediates the differential responses of A549 cells to sodium butyrate and sodium 4-phenylbutyrate treatment. Cancer Med. 2017;6:424-438 pubmed publisher |
- western blot; rat; loading ...; fig 1b
| Ruess D, Probst M, Marjanovic G, Wittel U, Hopt U, Keck T, et al. HDACi Valproic Acid (VPA) and Suberoylanilide Hydroxamic Acid (SAHA) Delay but Fail to Protect against Warm Hepatic Ischemia-Reperfusion Injury. PLoS ONE. 2016;11:e0161233 pubmed publisher |
- chromatin immunoprecipitation; human; loading ...; fig 6a
| Lubecka K, Kurzava L, Flower K, Buvala H, Zhang H, Teegarden D, et al. Stilbenoids remodel the DNA methylation patterns in breast cancer cells and inhibit oncogenic NOTCH signaling through epigenetic regulation of MAML2 transcriptional activity. Carcinogenesis. 2016;37:656-68 pubmed publisher |
- chromatin immunoprecipitation; mouse; fig 4
| Cozzolino A, Noce V, Battistelli C, Marchetti A, Grassi G, Cicchini C, et al. Modulating the Substrate Stiffness to Manipulate Differentiation of Resident Liver Stem Cells and to Improve the Differentiation State of Hepatocytes. Stem Cells Int. 2016;2016:5481493 pubmed publisher |
- chromatin immunoprecipitation; human; loading ...; fig 4
| Burda P, Vargova J, Curik N, Salek C, Papadopoulos G, Strouboulis J, et al. GATA-1 Inhibits PU.1 Gene via DNA and Histone H3K9 Methylation of Its Distal Enhancer in Erythroleukemia. PLoS ONE. 2016;11:e0152234 pubmed publisher |
- chromatin immunoprecipitation; human; fig 1
| Dheekollu J, Wiedmer A, Sentana Lledo D, Cassel J, Messick T, Lieberman P. HCF1 and OCT2 Cooperate with EBNA1 To Enhance OriP-Dependent Transcription and Episome Maintenance of Latent Epstein-Barr Virus. J Virol. 2016;90:5353-5367 pubmed publisher |
- chromatin immunoprecipitation; mouse; fig 6
| Lakisic G, Lebreton A, Pourpre R, Wendling O, Libertini E, Radford E, et al. Role of the BAHD1 Chromatin-Repressive Complex in Placental Development and Regulation of Steroid Metabolism. PLoS Genet. 2016;12:e1005898 pubmed publisher |
- chromatin immunoprecipitation; human; fig s3
| Brasa S, Mueller A, Jacquemont S, Hahne F, Rozenberg I, Peters T, et al. Reciprocal changes in DNA methylation and hydroxymethylation and a broad repressive epigenetic switch characterize FMR1 transcriptional silencing in fragile X syndrome. Clin Epigenetics. 2016;8:15 pubmed publisher |
- chromatin immunoprecipitation; Xenopus laevis; fig 4
| Tamaoki K, Okada R, Ishihara A, Shiojiri N, Mochizuki K, Goda T, et al. Morphological, biochemical, transcriptional and epigenetic responses to fasting and refeeding in intestine of Xenopus laevis. Cell Biosci. 2016;6:2 pubmed publisher |
| Yasuma K, Yasunaga J, Takemoto K, Sugata K, Mitobe Y, Takenouchi N, et al. HTLV-1 bZIP Factor Impairs Anti-viral Immunity by Inducing Co-inhibitory Molecule, T Cell Immunoglobulin and ITIM Domain (TIGIT). PLoS Pathog. 2016;12:e1005372 pubmed publisher |
| de Almeida B, Noronha R, da Costa M, Nagamachi C, Pieczarka J. Meiosis in the scorpion Tityus silvestris: new insights into achiasmatic chromosomes. Biol Open. 2019;8: pubmed publisher |
| Filipponi D, Emelyanov A, Müller J, Molina C, Nichols J, Bulavin D. DNA Damage Signaling-Induced Cancer Cell Reprogramming as a Driver of Tumor Relapse. Mol Cell. 2019;74:651-663.e8 pubmed publisher |
| Bao K, Shan C, Moresco J, Yates J, Jia S. Anti-silencing factor Epe1 associates with SAGA to regulate transcription within heterochromatin. Genes Dev. 2019;33:116-126 pubmed publisher |
| Coleman J, Lin B, Louie J, Peterson J, Lane R, Schwob J. Spatial Determination of Neuronal Diversification in the Olfactory Epithelium. J Neurosci. 2019;39:814-832 pubmed publisher |
| Bruzzone M, Grünberg S, Kubik S, Zentner G, Shore D. Distinct patterns of histone acetyltransferase and Mediator deployment at yeast protein-coding genes. Genes Dev. 2018;32:1252-1265 pubmed publisher |
| Slaughter M, Shanle E, McFadden A, Hollis E, Suttle L, Strahl B, et al. PBRM1 bromodomains variably influence nucleosome interactions and cellular function. J Biol Chem. 2018;293:13592-13603 pubmed publisher |
| Hsu E, Pennella M, Zemke N, Eng C, Berk A. Adenovirus E1A Activation Domain Regulates H3 Acetylation Affecting Varied Steps in Transcription at Different Viral Promoters. J Virol. 2018;92: pubmed publisher |
| Dumbovic G, Biayna J, Banús J, Samuelsson J, Roth A, Diederichs S, et al. A novel long non-coding RNA from NBL2 pericentromeric macrosatellite forms a perinucleolar aggregate structure in colon cancer. Nucleic Acids Res. 2018;46:5504-5524 pubmed publisher |
| Shindo T, Niinuma T, Nishiyama N, Shinkai N, Kitajima H, Kai M, et al. Epigenetic silencing of miR-200b is associated with cisplatin resistance in bladder cancer. Oncotarget. 2018;9:24457-24469 pubmed publisher |
| Xia Y, Hua R, Juan C, Zhong Z, Tao C, Fang R, et al. SIRT6 Depletion Sensitizes Human Hepatoma Cells to Chemotherapeutics by Downregulating MDR1 Expression. Front Pharmacol. 2018;9:194 pubmed publisher |
| Ferrer C, Alders M, Postma A, Park S, Klein M, Cetinbaş M, et al. An inactivating mutation in the histone deacetylase SIRT6 causes human perinatal lethality. Genes Dev. 2018;32:373-388 pubmed publisher |
| Hall A, Battenhouse A, Shivram H, Morris A, Cowperthwaite M, Shpak M, et al. Bivalent Chromatin Domains in Glioblastoma Reveal a Subtype-Specific Signature of Glioma Stem Cells. Cancer Res. 2018;78:2463-2474 pubmed publisher |
| Xi Y, Shi J, Li W, Tanaka K, Allton K, Richardson D, et al. Histone modification profiling in breast cancer cell lines highlights commonalities and differences among subtypes. BMC Genomics. 2018;19:150 pubmed publisher |
| Li P, Wang L, Bennett B, Wang J, Li J, Qin Y, et al. Rif1 promotes a repressive chromatin state to safeguard against endogenous retrovirus activation. Nucleic Acids Res. 2017;45:12723-12738 pubmed publisher |
| Mendoza A, Astapova I, Shimizu H, Gallop M, Al Sowaimel L, MacGowan S, et al. NCoR1-independent mechanism plays a role in the action of the unliganded thyroid hormone receptor. Proc Natl Acad Sci U S A. 2017;114:E8458-E8467 pubmed publisher |
| Wang L, Zhang F, Rode S, Chin K, Ko E, Kim J, et al. Ethylene induces combinatorial effects of histone H3 acetylation in gene expression in Arabidopsis. BMC Genomics. 2017;18:538 pubmed publisher |
| Venkataramanan S, Douglass S, Galivanche A, Johnson T. The chromatin remodeling complex Swi/Snf regulates splicing of meiotic transcripts in Saccharomyces cerevisiae. Nucleic Acids Res. 2017;45:7708-7721 pubmed publisher |
| Ioris R, Galié M, Ramadori G, Anderson J, Charollais A, Konstantinidou G, et al. SIRT6 Suppresses Cancer Stem-like Capacity in Tumors with PI3K Activation Independently of Its Deacetylase Activity. Cell Rep. 2017;18:1858-1868 pubmed publisher |
| Zhu A, Greaves I, Dennis E, Peacock W. Genome-wide analyses of four major histone modifications in Arabidopsis hybrids at the germinating seed stage. BMC Genomics. 2017;18:137 pubmed publisher |
| Mohibi S, Srivastava S, Bele A, Mirza S, Band H, Band V. Acetylation of Mammalian ADA3 Is Required for Its Functional Roles in Histone Acetylation and Cell Proliferation. Mol Cell Biol. 2016;36:2487-502 pubmed publisher |
| Takemata N, Oda A, Yamada T, Galipon J, Miyoshi T, Suzuki Y, et al. Local potentiation of stress-responsive genes by upstream noncoding transcription. Nucleic Acids Res. 2016;44:5174-89 pubmed publisher |
| Persson J, Steglich B, Smialowska A, Boyd M, Bornholdt J, Andersson R, et al. Regulating retrotransposon activity through the use of alternative transcription start sites. EMBO Rep. 2016;17:753-68 pubmed publisher |
| Inaba J, McConnell E, Davis K. Lunasin sensitivity in non-small cell lung cancer cells is linked to suppression of integrin signaling and changes in histone acetylation. Int J Mol Sci. 2014;15:23705-24 pubmed publisher |
