| Published Application/Species/Sample/Dilution | Reference |
|---|
- western blot; mouse; loading ...; fig 2b
| Qiu J, Villa M, Sanin D, Buck M, O Sullivan D, Ching R, et al. Acetate Promotes T Cell Effector Function during Glucose Restriction. Cell Rep. 2019;27:2063-2074.e5 pubmed publisher |
- chromatin immunoprecipitation; human; loading ...; fig 1d
| Song K, Kim J, Lee Y, Bae H, Lee H, Woo S, et al. Mitochondrial reprogramming via ATP5H loss promotes multimodal cancer therapy resistance. J Clin Invest. 2018;128:4098-4114 pubmed publisher |
- chromatin immunoprecipitation; mouse; loading ...; fig 4a
| Sacta M, Tharmalingam B, Coppo M, Rollins D, Deochand D, Benjamin B, et al. Gene-specific mechanisms direct glucocorticoid-receptor-driven repression of inflammatory response genes in macrophages. elife. 2018;7: pubmed publisher |
- immunohistochemistry; mouse; loading ...; fig 1a
| Schmitt H, Schlamp C, Nickells R. Targeting HDAC3 Activity with RGFP966 Protects Against Retinal Ganglion Cell Nuclear Atrophy and Apoptosis After Optic Nerve Injury. J Ocul Pharmacol Ther. 2018;34:260-273 pubmed publisher |
- chromatin immunoprecipitation; human; loading ...; fig s5a
- western blot; human; loading ...; fig s5a
| Liang Z, Brown K, Carroll T, Taylor B, Vidal I, Hendrich B, et al. A high-resolution map of transcriptional repression. elife. 2017;6: pubmed publisher |
- chromatin immunoprecipitation; mouse; loading ...; fig 1d
| Cheung K, Zhang F, Jaganathan A, Sharma R, Zhang Q, Konuma T, et al. Distinct Roles of Brd2 and Brd4 in Potentiating the Transcriptional Program for Th17 Cell Differentiation. Mol Cell. 2017;65:1068-1080.e5 pubmed publisher |
- chromatin immunoprecipitation; human; loading ...; fig 6b
| Lin Y, Lin Y, Huang M, Kuo P, Wu C, Lee M, et al. Tumor necrosis factor-alpha inhibitors suppress CCL2 chemokine in monocytes via epigenetic modification. Mol Immunol. 2017;83:82-91 pubmed publisher |
- chromatin immunoprecipitation; human; loading ...; fig s4d
| Wang D, Kon N, Lasso G, Jiang L, Leng W, Zhu W, et al. Acetylation-regulated interaction between p53 and SET reveals a widespread regulatory mode. Nature. 2016;538:118-122 pubmed publisher |
- chromatin immunoprecipitation; human; loading ...; fig 7d
| Gay G, Braun L, Brenier Pinchart M, Vollaire J, Josserand V, Bertini R, et al. Toxoplasma gondii TgIST co-opts host chromatin repressors dampening STAT1-dependent gene regulation and IFN-?-mediated host defenses. J Exp Med. 2016;213:1779-98 pubmed publisher |
- chromatin immunoprecipitation; human; loading ...; fig 4c
| Hong S, Eun J, Choi S, Shen Q, Choi W, Han J, et al. Epigenetic reader BRD4 inhibition as a therapeutic strategy to suppress E2F2-cell cycle regulation circuit in liver cancer. Oncotarget. 2016;7:32628-40 pubmed publisher |
- chromatin immunoprecipitation; mouse; fig 4
| Ma X, Xu L, Mueller E. Forkhead box A3 mediates glucocorticoid receptor function in adipose tissue. Proc Natl Acad Sci U S A. 2016;113:3377-82 pubmed publisher |
- western blot; mouse; 1:2000; fig s13
| Karuppagounder S, Alim I, Khim S, Bourassa M, Sleiman S, John R, et al. Therapeutic targeting of oxygen-sensing prolyl hydroxylases abrogates ATF4-dependent neuronal death and improves outcomes after brain hemorrhage in several rodent models. Sci Transl Med. 2016;8:328ra29 pubmed publisher |
- ChIP-Seq; mouse; fig 6
- western blot; mouse; fig 3b
| Gonzales Cope M, Sidoli S, Bhanu N, Won K, Garcia B. Histone H4 acetylation and the epigenetic reader Brd4 are critical regulators of pluripotency in embryonic stem cells. BMC Genomics. 2016;17:95 pubmed publisher |
- western blot; bovine; 1:4000; fig 2
- immunocytochemistry; Entamoeba histolytica; 1:1500; fig 3
- western blot; Entamoeba histolytica; 1:4000; fig 2
| Lozano Amado D, Herrera Solorio A, Valdés J, Alemán Lazarini L, Almaraz Barrera M, Luna Rivera E, et al. Identification of repressive and active epigenetic marks and nuclear bodies in Entamoeba histolytica. Parasit Vectors. 2016;9:19 pubmed publisher |
- western blot; human; fig 3
| Seidel C, Schnekenburger M, Mazumder A, Teiten M, Kirsch G, Dicato M, et al. 4-Hydroxybenzoic acid derivatives as HDAC6-specific inhibitors modulating microtubular structure and HSP90α chaperone activity against prostate cancer. Biochem Pharmacol. 2016;99:31-52 pubmed publisher |
| Wu R, Young I, Chen Y, Chuang S, Toubaji A, Wu M. Identification of the PTEN-ARID4B-PI3K pathway reveals the dependency on ARID4B by PTEN-deficient prostate cancer. Nat Commun. 2019;10:4332 pubmed publisher |
| Horvath A, Dániel B, Szeles L, Cuaranta Monroy I, Czimmerer Z, Ozgyin L, et al. Labelled regulatory elements are pervasive features of the macrophage genome and are dynamically utilized by classical and alternative polarization signals. Nucleic Acids Res. 2019;47:2778-2792 pubmed publisher |
| Engel M, Gee Y, Cross D, Maccarone A, Heng B, Hulme A, et al. Novel dual-action prodrug triggers apoptosis in glioblastoma cells by releasing a glutathione quencher and lysine-specific histone demethylase 1A inhibitor. J Neurochem. 2019;149:535-550 pubmed publisher |
| Kumar M, Kasti K, Balakrishnan L, Milavetz B. Directed Nucleosome Sliding during the Formation of the Simian Virus 40 Particle Exposes DNA Sequences Required for Early Transcription. J Virol. 2019;93: pubmed publisher |
| Belloni L, Di Cocco S, Guerrieri F, Nunn A, Piconese S, Salerno D, et al. Targeting a phospho-STAT3-miRNAs pathway improves vesicular hepatic steatosis in an in vitro and in vivo model. Sci Rep. 2018;8:13638 pubmed publisher |
| Kamada R, Yang W, Zhang Y, Patel M, Yang Y, Ouda R, et al. Interferon stimulation creates chromatin marks and establishes transcriptional memory. Proc Natl Acad Sci U S A. 2018;115:E9162-E9171 pubmed publisher |
| de Bruyn Kops A, Burke J, Guthrie C. Brr6 plays a role in gene recruitment and transcriptional regulation at the nuclear envelope. Mol Biol Cell. 2018;29:2578-2590 pubmed publisher |
| Bruzzone M, Grünberg S, Kubik S, Zentner G, Shore D. Distinct patterns of histone acetyltransferase and Mediator deployment at yeast protein-coding genes. Genes Dev. 2018;32:1252-1265 pubmed publisher |
| Zhao Z, Sentürk N, Song C, Grummt I. lncRNA PAPAS tethered to the rDNA enhancer recruits hypophosphorylated CHD4/NuRD to repress rRNA synthesis at elevated temperatures. Genes Dev. 2018;32:836-848 pubmed publisher |
| Ruiz L, Gurlo T, Ravier M, Wojtusciszyn A, Mathieu J, Brown M, et al. Proteasomal degradation of the histone acetyl transferase p300 contributes to beta-cell injury in a diabetes environment. Cell Death Dis. 2018;9:600 pubmed publisher |
| Cai S, Song Y, Chen C, Shi J, Gan L. Natural chromatin is heterogeneous and self-associates in vitro. Mol Biol Cell. 2018;29:1652-1663 pubmed publisher |
| Zhang Y, Wang S, Kang W, Liu C, Dong Y, Ren F, et al. CREPT facilitates colorectal cancer growth through inducing Wnt/β-catenin pathway by enhancing p300-mediated β-catenin acetylation. Oncogene. 2018;37:3485-3500 pubmed publisher |
| Campbell A, Shadle S, Jagannathan S, Lim J, Resnick R, Tawil R, et al. NuRD and CAF-1-mediated silencing of the D4Z4 array is modulated by DUX4-induced MBD3L proteins. elife. 2018;7: pubmed publisher |
| Nishitsuji H, Ujino S, Harada K, Shimotohno K. TIP60 Complex Inhibits Hepatitis B Virus Transcription. J Virol. 2018;92: pubmed publisher |
| Griggs C, Malm S, Jaime Frias R, Smith C. Valproic acid disrupts the oscillatory expression of core circadian rhythm transcription factors. Toxicol Appl Pharmacol. 2018;339:110-120 pubmed publisher |
| Villain G, Poissonnier L, Noueihed B, Bonfils G, Rivera J, Chemtob S, et al. miR-126-5p promotes retinal endothelial cell survival through SetD5 regulation in neurons. Development. 2018;145: pubmed publisher |
| Kiese K, Jablonski J, Hackenbracht J, Wrosch J, Groemer T, Kornhuber J, et al. Epigenetic control of epilepsy target genes contributes to a cellular memory of epileptogenesis in cultured rat hippocampal neurons. Acta Neuropathol Commun. 2017;5:79 pubmed publisher |
| Saavedra F, Rivera C, Rivas E, Merino P, Garrido D, Hernandez S, et al. PP32 and SET/TAF-I? proteins regulate the acetylation of newly synthesized histone H4. Nucleic Acids Res. 2017;45:11700-11710 pubmed publisher |
| Sepp M, Vihma H, Nurm K, Urb M, Page S, Roots K, et al. The Intellectual Disability and Schizophrenia Associated Transcription Factor TCF4 Is Regulated by Neuronal Activity and Protein Kinase A. J Neurosci. 2017;37:10516-10527 pubmed publisher |
| Boudoures A, Pfeil J, Steenkiste E, Hoffman R, Bailey E, Wilkes S, et al. A Novel Histone Crosstalk Pathway Important for Regulation of UV-Induced DNA Damage Repair in Saccharomyces cerevisiae. Genetics. 2017;206:1389-1402 pubmed publisher |
| Shimamoto Y, Tamura S, Masumoto H, Maeshima K. Nucleosome-nucleosome interactions via histone tails and linker DNA regulate nuclear rigidity. Mol Biol Cell. 2017;28:1580-1589 pubmed publisher |
| Guerrieri F, Belloni L, D Andrea D, Pediconi N, Le Pera L, Testoni B, et al. Genome-wide identification of direct HBx genomic targets. BMC Genomics. 2017;18:184 pubmed publisher |
| Feldman S, Wuerffel R, Achour I, Wang L, Carpenter P, Kenter A. 53BP1 Contributes to Igh Locus Chromatin Topology during Class Switch Recombination. J Immunol. 2017;198:2434-2444 pubmed publisher |
| Patanun O, Ueda M, Itouga M, Kato Y, Utsumi Y, Matsui A, et al. The Histone Deacetylase Inhibitor Suberoylanilide Hydroxamic Acid Alleviates Salinity Stress in Cassava. Front Plant Sci. 2016;7:2039 pubmed publisher |
| Rimando M, Wu H, Liu Y, Lee C, Kuo S, Lo Y, et al. Glucocorticoid receptor and Histone deacetylase 6 mediate the differential effect of dexamethasone during osteogenesis of mesenchymal stromal cells (MSCs). Sci Rep. 2016;6:37371 pubmed publisher |
| Xu X, Xu S, Fu L, Hu Q, Lv Y, Du L. Epigenetic changes in peripheral leucocytes as biomarkers in intrauterine growth retardation rat. Biomed Rep. 2016;5:548-552 pubmed |
| Contreras Jurado C, Alonso Merino E, Saiz Ladera C, Valiño A, Regadera J, Alemany S, et al. The Thyroid Hormone Receptors Inhibit Hepatic Interleukin-6 Signaling During Endotoxemia. Sci Rep. 2016;6:30990 pubmed publisher |
| Cheng T, Thompson D, O Mara T, Painter J, Glubb D, Flach S, et al. Five endometrial cancer risk loci identified through genome-wide association analysis. Nat Genet. 2016;48:667-674 pubmed publisher |
| Shi G, Yoshida Y, Yuki K, Nishimura T, Kawata Y, Kawashima M, et al. Pattern of RECK CpG methylation as a potential marker for predicting breast cancer prognosis and drug-sensitivity. Oncotarget. 2016;7:82158-82169 pubmed publisher |
| Chen J, Zheng Z, Chen Y, Li J, Qian S, Shi Y, et al. Histone Deacetylase Inhibitors Trichostatin A and MCP30 Relieve Benzene-Induced Hematotoxicity via Restoring Topoisomerase II?. PLoS ONE. 2016;11:e0153330 pubmed publisher |
| Rios E, Soriano F, Olah G, Gero D, Szczesny B, Szabo C. Hydrogen sulfide modulates chromatin remodeling and inflammatory mediator production in response to endotoxin, but does not play a role in the development of endotoxin tolerance. J Inflamm (Lond). 2016;13:10 pubmed publisher |
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