| Published Application/Species/Sample/Dilution | Reference |
|---|
| Casanova M, Moscatelli M, Chauvière L, Huret C, Samson J, Liyakat Ali T, et al. A primate-specific retroviral enhancer wires the XACT lncRNA into the core pluripotency network in humans. Nat Commun. 2019;10:5652 pubmed publisher |
- chromatin immunoprecipitation; mouse; loading ...; fig 3a
| Klein R, Tung P, Somanath P, Fehling H, Knoepfler P. Genomic functions of developmental pluripotency associated factor 4 (Dppa4) in pluripotent stem cells and cancer. Stem Cell Res. 2018;31:83-94 pubmed publisher |
- ChIP-Seq; human; loading ...
| van Groningen T, Koster J, Valentijn L, Zwijnenburg D, Akogul N, Hasselt N, et al. Neuroblastoma is composed of two super-enhancer-associated differentiation states. Nat Genet. 2017;49:1261-1266 pubmed publisher |
- chromatin immunoprecipitation; mouse; loading ...; fig 4b
| Mathew R, Tatarakis A, Rudenko A, Johnson Venkatesh E, Yang Y, Murphy E, et al. A microRNA negative feedback loop downregulates vesicle transport and inhibits fear memory. elife. 2016;5: pubmed publisher |
- western blot; mouse; loading ...; fig 3a
- western blot; human; loading ...; fig 3a
| Zhong J, Li X, Cai W, Wang Y, Dong S, Yang J, et al. TET1 modulates H4K16 acetylation by controlling auto-acetylation of hMOF to affect gene regulation and DNA repair function. Nucleic Acids Res. 2017;45:672-684 pubmed publisher |
- immunoprecipitation; human; fig 2
- western blot; mouse; fig 4
| Chung H, Xu C, Fuchs A, Mund A, Lange M, Staege H, et al. PHF13 is a molecular reader and transcriptional co-regulator of H3K4me2/3. elife. 2016;5: pubmed publisher |
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- chromatin immunoprecipitation; human; fig 6
| Theiss J, Gunther T, Alawi M, Neumann F, Tessmer U, Fischer N, et al. A Comprehensive Analysis of Replicating Merkel Cell Polyomavirus Genomes Delineates the Viral Transcription Program and Suggests a Role for mcv-miR-M1 in Episomal Persistence. PLoS Pathog. 2015;11:e1004974 pubmed publisher |
- chromatin immunoprecipitation; human; fig 5b
| Lee Y, Li Y, Su C, Chiao C, Lin I, Hsu M. MAF1 represses CDKN1A through a Pol III-dependent mechanism. elife. 2015;4:e06283 pubmed publisher |
- chromatin immunoprecipitation; human; fig 2
| Meidhof S, Brabletz S, Lehmann W, Preca B, Mock K, Ruh M, et al. ZEB1-associated drug resistance in cancer cells is reversed by the class I HDAC inhibitor mocetinostat. EMBO Mol Med. 2015;7:831-47 pubmed publisher |
| Xu J, Shao Z, Li D, Xie H, Kim W, Huang J, et al. Developmental control of polycomb subunit composition by GATA factors mediates a switch to non-canonical functions. Mol Cell. 2015;57:304-316 pubmed publisher |
- chromatin immunoprecipitation; mouse; fig 5
| Tusi B, Deng C, Salz T, Zeumer L, Li Y, So C, et al. Setd1a regulates progenitor B-cell-to-precursor B-cell development through histone H3 lysine 4 trimethylation and Ig heavy-chain rearrangement. FASEB J. 2015;29:1505-15 pubmed publisher |
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- immunocytochemistry; human
| Luense S, Denner P, Fernández Montalván A, Hartung I, Husemann M, Stresemann C, et al. Quantification of histone H3 Lys27 trimethylation (H3K27me3) by high-throughput microscopy enables cellular large-scale screening for small-molecule EZH2 inhibitors. J Biomol Screen. 2015;20:190-201 pubmed publisher |
- chromatin immunoprecipitation; human; fig 5
- western blot; human; fig 1
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- chromatin immunoprecipitation; human
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- chromatin immunoprecipitation; human
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- chromatin immunoprecipitation; mouse
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- chromatin immunoprecipitation; chicken
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- chromatin immunoprecipitation; Saccharomyces cerevisiae S288C
| Weiner A, Chen H, Liu C, Rahat A, Klien A, Soares L, et al. Systematic dissection of roles for chromatin regulators in a yeast stress response. PLoS Biol. 2012;10:e1001369 pubmed publisher |
- chromatin immunoprecipitation; African green monkey
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- chromatin immunoprecipitation; mouse
| Weishaupt H, Attema J. A Method to Study the Epigenetic Chromatin States of Rare Hematopoietic Stem and Progenitor Cells; MiniChIP-Chip. Biol Proced Online. 2010;12:1-17 pubmed publisher |
- chromatin immunoprecipitation; human
- western blot; human; 1:2000
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- chromatin immunoprecipitation; human
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| Ali M, Ajore R, Wihlborg A, Niroula A, Swaminathan B, Johnsson E, et al. The multiple myeloma risk allele at 5q15 lowers ELL2 expression and increases ribosomal gene expression. Nat Commun. 2018;9:1649 pubmed publisher |
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| Li Y, Zheng H, Wang Q, Zhou C, Wei L, Liu X, et al. Genome-wide analyses reveal a role of Polycomb in promoting hypomethylation of DNA methylation valleys. Genome Biol. 2018;19:18 pubmed publisher |
| Xu M, Leichty A, Hu T, Poethig R. H2A.Z promotes the transcription of MIR156A and MIR156C in Arabidopsis by facilitating the deposition of H3K4me3. Development. 2018;145: pubmed publisher |
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| Kaushik S, Liu F, Veazey K, Gao G, Das P, Neves L, et al. Genetic deletion or small-molecule inhibition of the arginine methyltransferase PRMT5 exhibit anti-tumoral activity in mouse models of MLL-rearranged AML. Leukemia. 2018;32:499-509 pubmed publisher |
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| Huggins I, Bos T, Gaylord O, Jessen C, Lonquich B, Puranen A, et al. The WNT target SP5 negatively regulates WNT transcriptional programs in human pluripotent stem cells. Nat Commun. 2017;8:1034 pubmed publisher |
| Li H, Liefke R, Jiang J, Kurland J, Tian W, Deng P, et al. Polycomb-like proteins link the PRC2 complex to CpG islands. Nature. 2017;549:287-291 pubmed publisher |
| Joung J, Engreitz J, Konermann S, Abudayyeh O, Verdine V, Aguet F, et al. Genome-scale activation screen identifies a lncRNA locus regulating a gene neighbourhood. Nature. 2017;548:343-346 pubmed publisher |
| Jih G, Iglesias N, Currie M, Bhanu N, Paulo J, Gygi S, et al. Unique roles for histone H3K9me states in RNAi and heritable silencing of transcription. Nature. 2017;547:463-467 pubmed publisher |
| Kim J, Hu Z, Cai L, Li K, Choi E, Faubert B, et al. CPS1 maintains pyrimidine pools and DNA synthesis in KRAS/LKB1-mutant lung cancer cells. Nature. 2017;546:168-172 pubmed publisher |
| Kim J, Jin H, Zhao J, Yang Y, Li Y, Yang X, et al. FOXA1 inhibits prostate cancer neuroendocrine differentiation. Oncogene. 2017;36:4072-4080 pubmed publisher |
| Fogarty E, Brewer M, Rodriguez Molina J, Law W, Ma K, Steinberg N, et al. SOX10 regulates an alternative promoter at the Charcot-Marie-Tooth disease locus MTMR2. Hum Mol Genet. 2016;25:3925-3936 pubmed publisher |
| Hsu C, Wu P, Chen T, Yu C, Tsai W, Wu K, et al. Histone acetylation accompanied with promoter sequences displaying differential expression profiles of B-class MADS-box genes for phalaenopsis floral morphogenesis. PLoS ONE. 2014;9:e106033 pubmed publisher |
| Xue M, Long J, Jiang Q, Wang M, Chen S, Pang Q, et al. Distinct patterns of the histone marks associated with recruitment of the methionine chain-elongation pathway from leucine biosynthesis. J Exp Bot. 2015;66:805-12 pubmed publisher |
| Ellison T, Kedes D. Variable episomal silencing of a recombinant herpesvirus renders its encoded GFP an unreliable marker of infection in primary cells. PLoS ONE. 2014;9:e111502 pubmed publisher |
| Tarrio M, Lee S, Fragoso M, Sun H, Kanno Y, O Shea J, et al. Proliferation conditions promote intrinsic changes in NK cells for an IL-10 response. J Immunol. 2014;193:354-63 pubmed publisher |
| Flouriot G, Huet G, Demay F, Pakdel F, Boujrad N, Michel D. The actin/MKL1 signalling pathway influences cell growth and gene expression through large-scale chromatin reorganization and histone post-translational modifications. Biochem J. 2014;461:257-68 pubmed publisher |
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| Prescott E, Safi A, Rusche L. A region of the nucleosome required for multiple types of transcriptional silencing in Saccharomyces cerevisiae. Genetics. 2011;188:535-48 pubmed publisher |
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