| Published Application/Species/Sample/Dilution | Reference | 
|---|
| flow cytometry; human; loading ...; fig 3h
 | Gregorova M, Morse D, Brignoli T, Steventon J, Hamilton F, Albur M, et al . Post-acute COVID-19 associated with evidence of bystander T-cell activation and a recurring antibiotic-resistant bacterial pneumonia. elife. 2020;9: pubmed  publisher | 
| flow cytometry; human; 3:50; loading ...; fig 1c
 | Park J, Botting R, Domínguez Conde C, Popescu D, Lavaert M, Kunz D, et al . A cell atlas of human thymic development defines T cell repertoire formation. Science. 2020;367: pubmed  publisher | 
| flow cytometry; human; loading ...; fig s6c
 | Stewart B, Ferdinand J, Young M, Mitchell T, Loudon K, Riding A, et al . Spatiotemporal immune zonation of the human kidney. Science. 2019;365:1461-1466 pubmed  publisher | 
| flow cytometry; human; loading ...; fig s1
 | Inagaki Katashiba N, Ito T, Inaba M, Azuma Y, Tanaka A, Phan V, et al . Statins can suppress DC-mediated Th2 responses through the repression of OX40-ligand and CCL17 expression. Eur J Immunol. 2019;49:2051-2062 pubmed  publisher | 
| flow cytometry; human; loading ...; fig s1
 | Boscheinen J, Thomann S, Knipe D, Deluca N, Schuler Thurner B, Gross S, et al . Generation of an Oncolytic Herpes Simplex Virus 1 Expressing Human MelanA. Front Immunol. 2019;10:2 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 1a
 | Jegaskanda S, Vanderven H, Tan H, Alcantara S, Wragg K, Parsons M, et al . Influenza Virus Infection Enhances Antibody-Mediated NK Cell Functions via Type I Interferon-Dependent Pathways. J Virol. 2019;93: pubmed  publisher | 
| flow cytometry; human; loading ...; fig s6d
 | Bradley T, Peppa D, Pedroza Pacheco I, Li D, Cain D, Henao R, et al . RAB11FIP5 Expression and Altered Natural Killer Cell Function Are Associated with Induction of HIV Broadly Neutralizing Antibody Responses. Cell. 2018;175:387-399.e17 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 1a
 | Olin A, Henckel E, Chen Y, Lakshmikanth T, Pou C, Mikes J, et al . Stereotypic Immune System Development in Newborn Children. Cell. 2018;174:1277-1292.e14 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 3a
 | Li N, van Unen V, Höllt T, Thompson A, van Bergen J, Pezzotti N, et al . Mass cytometry reveals innate lymphoid cell differentiation pathways in the human fetal intestine. J Exp Med. 2018;215:1383-1396 pubmed  publisher | 
|  | Debliquis A, Voirin J, Harzallah I, Maurer M, Lerintiu F, Drenou B, et al . Cytomorphology and flow cytometry of brain biopsy rinse fluid enables faster and multidisciplinary diagnosis of large B-cell lymphoma of the central nervous system. Cytometry B Clin Cytom. 2018;94:182-188 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 5c
 | Jasinski Bergner S, Büttner M, Quandt D, Seliger B, Kielstein H. Adiponectin and Its Receptors Are Differentially Expressed in Human Tissues and Cell Lines of Distinct Origin. Obes Facts. 2017;10:569-583 pubmed  publisher | 
| flow cytometry; human; loading ...; fig s4a
 | Salio M, Gasser O, González López C, Martens A, Veerapen N, Gileadi U, et al . Activation of Human Mucosal-Associated Invariant T Cells Induces CD40L-Dependent Maturation of Monocyte-Derived and Primary Dendritic Cells. J Immunol. 2017;199:2631-2638 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 1b
 | Lunemann S, Martrus G, Goebels H, Kautz T, Langeneckert A, Salzberger W, et al . Hobit expression by a subset of human liver-resident CD56bright Natural Killer cells. Sci Rep. 2017;7:6676 pubmed  publisher | 
| mass cytometry; human; loading ...; fig 2a
 | Chew V, Lai L, Pan L, Lim C, Li J, Ong R, et al . Delineation of an immunosuppressive gradient in hepatocellular carcinoma using high-dimensional proteomic and transcriptomic analyses. Proc Natl Acad Sci U S A. 2017;114:E5900-E5909 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 5a
 | Dias J, Leeansyah E, Sandberg J. Multiple layers of heterogeneity and subset diversity in human MAIT cell responses to distinct microorganisms and to innate cytokines. Proc Natl Acad Sci U S A. 2017;114:E5434-E5443 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 1c
 | Allan D, Cerdeira A, Ranjan A, Kirkham C, Aguilar O, Tanaka M, et al . Transcriptome analysis reveals similarities between human blood CD3- CD56bright cells and mouse CD127+ innate lymphoid cells. Sci Rep. 2017;7:3501 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 3a
 | Tong A, Hashem H, Eid S, Allen F, Kingsley D, Huang A. Adoptive natural killer cell therapy is effective in reducing pulmonary metastasis of Ewing sarcoma. Oncoimmunology. 2017;6:e1303586 pubmed  publisher | 
| mass cytometry; human; loading ...; fig s3a
 | See P, Dutertre C, Chen J, Günther P, McGovern N, Irac S, et al . Mapping the human DC lineage through the integration of high-dimensional techniques. Science. 2017;356: pubmed  publisher | 
| flow cytometry; human; loading ...; fig 2
 | Sairafi D, Stikvoort A, Gertow J, Mattsson J, Uhlin M. Donor Cell Composition and Reactivity Predict Risk of Acute Graft-versus-Host Disease after Allogeneic Hematopoietic Stem Cell Transplantation. J Immunol Res. 2016;2016:5601204 pubmed | 
| flow cytometry; human; 1:25; loading ...; fig 1b
 | Matsuoka Y, Takahashi M, Sumide K, Kawamura H, Nakatsuka R, Fujioka T, et al . CD34 Antigen and the MPL Receptor Expression Defines a Novel Class of Human Cord Blood-Derived Primitive Hematopoietic Stem Cells. Cell Transplant. 2017;26:1043-1058 pubmed  publisher | 
| flow cytometry; human; loading ...; tbl 1
 | Sumatoh H, Teng K, Cheng Y, Newell E. Optimization of mass cytometry sample cryopreservation after staining. Cytometry A. 2017;91:48-61 pubmed  publisher | 
| flow cytometry; human; fig 1b
 | Cuff A, Robertson F, Stegmann K, Pallett L, Maini M, Davidson B, et al . Eomeshi NK Cells in Human Liver Are Long-Lived and Do Not Recirculate but Can Be Replenished from the Circulation. J Immunol. 2016;197:4283-4291 pubmed | 
| flow cytometry; human; loading ...; fig 5b
 | Osterburg A, Nelson R, Yaniv B, Foot R, Donica W, Nashu M, et al . NK cell activating receptor ligand expression in lymphangioleiomyomatosis is associated with lung function decline. JCI Insight. 2016;1:e87270 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 7b
 | Yeap W, Wong K, Shimasaki N, Teo E, Quek J, Yong H, et al . CD16 is indispensable for antibody-dependent cellular cytotoxicity by human monocytes. Sci Rep. 2016;6:34310 pubmed  publisher | 
| flow cytometry; human; loading ...
 | Wang Y, Ma C, Ling Y, Bousfiha A, Camcioglu Y, Jacquot S, et al . Dual T cell- and B cell-intrinsic deficiency in humans with biallelic RLTPR mutations. J Exp Med. 2016;213:2413-2435 pubmed | 
| flow cytometry; human; loading ...; fig 1
 | Kelly A, Robinson M, Roche G, Biron C, O Farrelly C, Ryan E. Immune Cell Profiling of IFN-? Response Shows pDCs Express Highest Level of IFN-?R1 and Are Directly Responsive via the JAK-STAT Pathway. J Interferon Cytokine Res. 2016;36:671-680 pubmed | 
| flow cytometry; common marmoset; loading ...; fig 6a
 | Manickam C, Rajakumar P, Wachtman L, Kramer J, Martinot A, Varner V, et al . Acute Liver Damage Associated with Innate Immune Activation in a Small Nonhuman Primate Model of Hepacivirus Infection. J Virol. 2016;90:9153-62 pubmed  publisher | 
| flow cytometry; human; loading ...; fig e2e
 | Chen H, Händel N, Ngeow J, Muller J, Huhn M, Yang H, et al . Immune dysregulation in patients with PTEN hamartoma tumor syndrome: Analysis of FOXP3 regulatory T cells. J Allergy Clin Immunol. 2017;139:607-620.e15 pubmed  publisher | 
| flow cytometry; human; loading ...; fig s5b
 | Kwon H, Choi G, Ryu S, Kwon S, Kim S, Booth C, et al . Stepwise phosphorylation of p65 promotes NF-?B activation and NK cell responses during target cell recognition. Nat Commun. 2016;7:11686 pubmed  publisher | 
| flow cytometry; human; fig 2
 | Theorell J, Bryceson Y. Analysis of Intracellular Ca(2+) Mobilization in Human NK Cell Subsets by Flow Cytometry. Methods Mol Biol. 2016;1441:117-30 pubmed  publisher | 
| mass cytometry; human; loading ...; tbl 1, 2
 | Kay A, Strauss Albee D, Blish C. Application of Mass Cytometry (CyTOF) for Functional and Phenotypic Analysis of Natural Killer Cells. Methods Mol Biol. 2016;1441:13-26 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 2d
 | Stikvoort A, Sundin M, Uzunel M, Gertow J, Sundberg B, Schaffer M, et al . Long-Term Stable Mixed Chimerism after Hematopoietic Stem Cell Transplantation in Patients with Non-Malignant Disease, Shall We Be Tolerant?. PLoS ONE. 2016;11:e0154737 pubmed  publisher | 
| flow cytometry; human; tbl 2
 | Lisenko K, Schönland S, Hegenbart U, Wallenwein K, Braun U, Mai E, et al . Potential therapeutic targets in plasma cell disorders: A flow cytometry study. Cytometry B Clin Cytom. 2017;92:145-152 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 1b
 | Lee W, Richard J, Lichtfuss M, Smith A, Park J, Courter J, et al . Antibody-Dependent Cellular Cytotoxicity against Reactivated HIV-1-Infected Cells. J Virol. 2016;90:2021-30 pubmed  publisher | 
| flow cytometry; human; loading ...; fig s1e
 | Schulz A, Mälzer J, Domingo C, Jürchott K, Grützkau A, Babel N, et al . Low Thymic Activity and Dendritic Cell Numbers Are Associated with the Immune Response to Primary Viral Infection in Elderly Humans. J Immunol. 2015;195:4699-711 pubmed  publisher | 
| flow cytometry; marmosets; loading ...
 | Dunham J, Lee L, van Driel N, Laman J, Ni I, Zhai W, et al . Blockade of CD127 Exerts a Dichotomous Clinical Effect in Marmoset Experimental Autoimmune Encephalomyelitis. J Neuroimmune Pharmacol. 2016;11:73-83 pubmed  publisher | 
| flow cytometry; rhesus macaque; loading ...; fig 5a
 | Evans T, Li H, Schafer J, Klatt N, Hao X, Traslavina R, et al . SIV-induced Translocation of Bacterial Products in the Liver Mobilizes Myeloid Dendritic and Natural Killer Cells Associated With Liver Damage. J Infect Dis. 2016;213:361-9 pubmed  publisher | 
| flow cytometry; human; fig S1
 | Perriard G, Mathias A, Enz L, Canales M, Schluep M, Gentner M, et al . Interleukin-22 is increased in multiple sclerosis patients and targets astrocytes. J Neuroinflammation. 2015;12:119 pubmed  publisher | 
| flow cytometry; human; 1:100; fig 1
 | Wang Z, Wan Y, Qiu C, Quiñones Parra S, Zhu Z, Loh L, et al . Recovery from severe H7N9 disease is associated with diverse response mechanisms dominated by CD8⺠T cells. Nat Commun. 2015;6:6833 pubmed  publisher | 
| flow cytometry; mouse; fig s1a
 | Chijioke O, Marcenaro E, Moretta A, Capaul R, Münz C. Role of the 2B4 Receptor in CD8+ T-Cell-Dependent Immune Control of Epstein-Barr Virus Infection in Mice With Reconstituted Human Immune System Components. J Infect Dis. 2015;212:803-7 pubmed  publisher | 
|  | Hagberg N, Theorell J, Hjorton K, Spee P, Eloranta M, Bryceson Y, et al . Functional anti-CD94/NKG2A and anti-CD94/NKG2C autoantibodies in patients with systemic lupus erythematosus. Arthritis Rheumatol. 2015;67:1000-11 pubmed  publisher | 
|  | Presnell S, Al Attar A, Cichocki F, Miller J, Lutz C. Human natural killer cell microRNA: differential expression of MIR181A1B1 and MIR181A2B2 genes encoding identical mature microRNAs. Genes Immun. 2015;16:89-98 pubmed  publisher | 
| flow cytometry; human; fig s3
 | Milne P, Bigley V, Gunawan M, Haniffa M, Collin M. CD1c+ blood dendritic cells have Langerhans cell potential. Blood. 2015;125:470-3 pubmed  publisher | 
| flow cytometry; rhesus macaque
 | Fujita T, Burwitz B, Chew G, Reed J, Pathak R, Seger E, et al . Expansion of dysfunctional Tim-3-expressing effector memory CD8+ T cells during simian immunodeficiency virus infection in rhesus macaques. J Immunol. 2014;193:5576-83 pubmed  publisher | 
| immunohistochemistry - frozen section; human; 1:100
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|  | Ito S, Bollard C, Carlsten M, Melenhorst J, Biancotto A, Wang E, et al . Ultra-low dose interleukin-2 promotes immune-modulating function of regulatory T cells and natural killer cells in healthy volunteers. Mol Ther. 2014;22:1388-1395 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 1
 | Chang S, Kohrt H, Maecker H. Monitoring the immune competence of cancer patients to predict outcome. Cancer Immunol Immunother. 2014;63:713-9 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 1a
 | Doi H, Tanoue S, Kaplan D. Peripheral CD27-CD21- B-cells represent an exhausted lymphocyte population in hepatitis C cirrhosis. Clin Immunol. 2014;150:184-91 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 9
 | Trist H, Tan P, Wines B, Ramsland P, Orlowski E, Stubbs J, et al . Polymorphisms and interspecies differences of the activating and inhibitory Fc?RII of Macaca nemestrina influence the binding of human IgG subclasses. J Immunol. 2014;192:792-803 pubmed  publisher | 
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|  | Pollara J, Jones D, Huffman T, Edwards R, Dennis M, Li S, et al . Bridging Vaccine-Induced HIV-1 Neutralizing and Effector Antibody Responses in Rabbit and Rhesus Macaque Animal Models. J Virol. 2019;93: pubmed  publisher | 
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|  | Schlenner S, Pasciuto E, Lagou V, Burton O, Prezzemolo T, Junius S, et al . NFIL3 mutations alter immune homeostasis and sensitise for arthritis pathology. Ann Rheum Dis. 2019;78:342-349 pubmed  publisher | 
|  | Yurick D, Khoury G, Clemens B, Loh L, Pham H, Kedzierska K, et al . Multiplex Droplet Digital PCR Assay for Quantification of Human T-Cell Leukemia Virus Type 1 Subtype c DNA Proviral Load and T Cells from Blood and Respiratory Exudates Sampled in a Remote Setting. J Clin Microbiol. 2019;57: pubmed  publisher | 
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|  | Backes C, Friedmann K, Mang S, Knörck A, Hoth M, Kummerow C. Natural killer cells induce distinct modes of cancer cell death: Discrimination, quantification, and modulation of apoptosis, necrosis, and mixed forms. J Biol Chem. 2018;293:16348-16363 pubmed  publisher | 
|  | Ulrichts P, Guglietta A, Dreier T, van Bragt T, Hanssens V, Hofman E, et al . Neonatal Fc receptor antagonist efgartigimod safely and sustainably reduces IgGs in humans. J Clin Invest. 2018;128:4372-4386 pubmed  publisher | 
|  | Kristensen A, Kent S, Parsons M. Contribution of NK Cell Education to both Direct and Anti-HIV-1 Antibody-Dependent NK Cell Functions. J Virol. 2018;92: pubmed  publisher | 
|  | Wagstaffe H, Nielsen C, Riley E, Goodier M. IL-15 Promotes Polyfunctional NK Cell Responses to Influenza by Boosting IL-12 Production. J Immunol. 2018;200:2738-2747 pubmed  publisher | 
|  | Bogaert D, Kuehn H, Bonroy C, Calvo K, Dehoorne J, Vanlander A, et al . A novel IKAROS haploinsufficiency kindred with unexpectedly late and variable B-cell maturation defects. J Allergy Clin Immunol. 2018;141:432-435.e7 pubmed  publisher | 
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|  | Kaczmarek D, Kokordelis P, Kramer B, Glässner A, Wolter F, Goeser F, et al . Alterations of the NK cell pool in HIV/HCV co-infection. PLoS ONE. 2017;12:e0174465 pubmed  publisher | 
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