| Published Application/Species/Sample/Dilution | Reference | 
|---|
| flow cytometry; human; loading ...; fig s6c
 | Stewart B, Ferdinand J, Young M, Mitchell T, Loudon K, Riding A, et al . Spatiotemporal immune zonation of the human kidney. Science. 2019;365:1461-1466 pubmed  publisher | 
| flow cytometry; human; loading ...; fig s8
 | Pavel Dinu M, Wiebking V, Dejene B, Srifa W, Mantri S, Nicolas C, et al . Gene correction for SCID-X1 in long-term hematopoietic stem cells. Nat Commun. 2019;10:1634 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 4a
 | Golay J, Valgardsdottir R, Musaraj G, Giupponi D, Spinelli O, Introna M. Human neutrophils express low levels of FcγRIIIA, which plays a role in PMN activation. Blood. 2019;: pubmed  publisher | 
| flow cytometry; human; loading ...; fig 1a
 | Watanabe N, Takaku T, Takeda K, Shirane S, Toyota T, Koike M, et al . Dasatinib-induced anti-leukemia cellular immunity through a novel subset of CD57 positive helper/cytotoxic CD4 T cells in chronic myelogenous leukemia patients. Int J Hematol. 2018;108:588-597 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 1b
 | Keszei M, Record J, Kritikou J, Wurzer H, Geyer C, Thiemann M, et al . Constitutive activation of WASp in X-linked neutropenia renders neutrophils hyperactive. J Clin Invest. 2018;128:4115-4131 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 1a
 | Cooper G, Ostridge K, Khakoo S, Wilkinson T, Staples K. Human CD49a+ Lung Natural Killer Cell Cytotoxicity in Response to Influenza A Virus. Front Immunol. 2018;9:1671 pubmed  publisher | 
| flow cytometry; human; fig s4
 | Yang T, St John L, Garber H, Kerros C, Ruisaard K, Clise Dwyer K, et al . Membrane-Associated Proteinase 3 on Granulocytes and Acute Myeloid Leukemia Inhibits T Cell Proliferation. J Immunol. 2018;201:1389-1399 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 1a
 | Desimio M, Giuliani E, Ferraro A, Adorno G, Doria M. In Vitro Exposure to Prostratin but Not Bryostatin-1 Improves Natural Killer Cell Functions Including Killing of CD4+ T Cells Harboring Reactivated Human Immunodeficiency Virus. Front Immunol. 2018;9:1514 pubmed  publisher | 
| flow cytometry; human; loading ...; fig s4a
 | Yeo L, Woodwyk A, Sood S, Lorenc A, Eichmann M, Pujol Autonell I, et al . Autoreactive T effector memory differentiation mirrors β cell function in type 1 diabetes. J Clin Invest. 2018;128:3460-3474 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 4b
 | Manickam C, Nwanze C, Ram D, Shah S, Smith S, Jones R, et al . Progressive lentivirus infection induces natural killer cell receptor-expressing B cells in the gastrointestinal tract. AIDS. 2018;32:1571-1578 pubmed  publisher | 
| flow cytometry; human; loading ...; fig s1
 | Chan Y, Zuo J, Inman C, Croft W, Begum J, Croudace J, et al . NK cells produce high levels of IL-10 early after allogeneic stem cell transplantation and suppress development of acute GVHD. Eur J Immunol. 2018;48:316-329 pubmed  publisher | 
| flow cytometry; human; fig 2a
 | Jeong J, Hong S, Kwon O, Ghang B, Hwang I, Kim Y, et al . CD14+ Cells with the Phenotype of Infiltrated Monocytes Consist of Distinct Populations Characterized by Anti-inflammatory as well as Pro-inflammatory Activity in Gouty Arthritis. Front Immunol. 2017;8:1260 pubmed  publisher | 
| flow cytometry; human; loading ...; fig s1a
 | Lerner T, Borel S, Greenwood D, Repnik U, Russell M, Herbst S, et al . Mycobacterium tuberculosis replicates within necrotic human macrophages. J Cell Biol. 2017;216:583-594 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 4a
 | Malnati M, Ugolotti E, Monti M, Battista D, Vanni I, Bordo D, et al . Activating Killer Immunoglobulin Receptors and HLA-C: a successful combination providing HIV-1 control. Sci Rep. 2017;7:42470 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 5
 | O CONNOR D, Clutterbuck E, Thompson A, Snape M, Ramasamy M, Kelly D, et al . High-dimensional assessment of B-cell responses to quadrivalent meningococcal conjugate and plain polysaccharide vaccine. Genome Med. 2017;9:11 pubmed  publisher | 
| flow cytometry; human; loading ...
 | Wentink M, Dalm V, Lankester A, van Schouwenburg P, Schölvinck L, Kalina T, et al . Genetic defects in PI3K? affect B-cell differentiation and maturation leading to hypogammaglobulineamia and recurrent infections. Clin Immunol. 2017;176:77-86 pubmed  publisher | 
| flow cytometry; human; loading ...
 | Kim J, Kwon C, Joh J, Sinn D, Choi G, Park J, et al . Differences in Peripheral Blood Lymphocytes between Brand-Name and Generic Tacrolimus Used in Stable Liver Transplant Recipients. Med Princ Pract. 2017;26:221-228 pubmed  publisher | 
| flow cytometry; human; loading ...
 | Tauriainen J, Scharf L, Frederiksen J, Naji A, Ljunggren H, Sonnerborg A, et al . Perturbed CD8+ T cell TIGIT/CD226/PVR axis despite early initiation of antiretroviral treatment in HIV infected individuals. Sci Rep. 2017;7:40354 pubmed  publisher | 
| flow cytometry; crab eating macaque; loading ...; fig 3a
 | Wonderlich E, Swan Z, Bissel S, Hartman A, Carney J, O Malley K, et al . Widespread Virus Replication in Alveoli Drives Acute Respiratory Distress Syndrome in Aerosolized H5N1 Influenza Infection of Macaques. J Immunol. 2017;198:1616-1626 pubmed  publisher | 
| flow cytometry; human; fig 5
 | Esnault S, Johansson M, Kelly E, Koenderman L, Mosher D, Jarjour N. IL-3 up-regulates and activates human eosinophil CD32 and αMβ2 integrin causing degranulation. Clin Exp Allergy. 2017;47:488-498 pubmed  publisher | 
| flow cytometry; human; tbl 3
 | Fromm J, Thomas A, Wood B. Characterization and Purification of Neoplastic Cells of Nodular Lymphocyte Predominant Hodgkin Lymphoma from Lymph Nodes by Flow Cytometry and Flow Cytometric Cell Sorting. Am J Pathol. 2017;187:304-317 pubmed  publisher | 
| flow cytometry; human; fig 2c
 | Casamayor Genescà A, Pla A, Oliver Vila I, Pujals Fonts N, Marín Gallén S, Caminal M, et al . Clinical-scale expansion of CD34+ cord blood cells amplifies committed progenitors and rapid scid repopulation cells. N Biotechnol. 2017;35:19-29 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 4a
 | Faivre V, Lukaszewicz A, Payen D. Downregulation of Blood Monocyte HLA-DR in ICU Patients Is Also Present in Bone Marrow Cells. PLoS ONE. 2016;11:e0164489 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 1b
 | Ju X, Silveira P, Hsu W, Elgundi Z, Alingcastre R, Verma N, et al . The Analysis of CD83 Expression on Human Immune Cells Identifies a Unique CD83+-Activated T Cell Population. J Immunol. 2016;197:4613-4625 pubmed | 
| flow cytometry; human; loading ...; fig 5b
 | Osterburg A, Nelson R, Yaniv B, Foot R, Donica W, Nashu M, et al . NK cell activating receptor ligand expression in lymphangioleiomyomatosis is associated with lung function decline. JCI Insight. 2016;1:e87270 pubmed  publisher | 
| flow cytometry; human; loading ...
 | Wang Y, Ma C, Ling Y, Bousfiha A, Camcioglu Y, Jacquot S, et al . Dual T cell- and B cell-intrinsic deficiency in humans with biallelic RLTPR mutations. J Exp Med. 2016;213:2413-2435 pubmed | 
| flow cytometry; rhesus macaque; loading ...; fig 5a
 | Vargas Inchaustegui D, Ying O, Demberg T, Robert Guroff M. Evaluation of Functional NK Cell Responses in Vaccinated and SIV-Infected Rhesus Macaques. Front Immunol. 2016;7:340 pubmed  publisher | 
| flow cytometry; rhesus macaque; loading ...; fig 4a
 | DeGottardi M, Okoye A, Vaidya M, Talla A, Konfe A, Reyes M, et al . Effect of Anti-IL-15 Administration on T Cell and NK Cell Homeostasis in Rhesus Macaques. J Immunol. 2016;197:1183-98 pubmed  publisher | 
| flow cytometry; human; loading ...; fig s8a
 | Theurl I, Hilgendorf I, Nairz M, Tymoszuk P, Haschka D, Asshoff M, et al . On-demand erythrocyte disposal and iron recycling requires transient macrophages in the liver. Nat Med. 2016;22:945-51 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 3b
 | Lo T, Silveira P, Fromm P, Verma N, Vu P, Kupresanin F, et al . Characterization of the Expression and Function of the C-Type Lectin Receptor CD302 in Mice and Humans Reveals a Role in Dendritic Cell Migration. J Immunol. 2016;197:885-98 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 1a
 | Gadd V, Patel P, Jose S, Horsfall L, Powell E, Irvine K. Altered Peripheral Blood Monocyte Phenotype and Function in Chronic Liver Disease: Implications for Hepatic Recruitment and Systemic Inflammation. PLoS ONE. 2016;11:e0157771 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 1e
 | Loyon R, Picard E, Mauvais O, Queiroz L, Mougey V, Pallandre J, et al . IL-21-Induced MHC Class II+ NK Cells Promote the Expansion of Human Uncommitted CD4+ Central Memory T Cells in a Macrophage Migration Inhibitory Factor-Dependent Manner. J Immunol. 2016;197:85-96 pubmed  publisher | 
| flow cytometry; African green monkey; loading ...; fig 2a
 | Neumann B, Shi T, Gan L, Klippert A, Daskalaki M, Stolte Leeb N, et al . Comprehensive panel of cross-reacting monoclonal antibodies for analysis of different immune cells and their distribution in the common marmoset (Callithrix jacchus). J Med Primatol. 2016;45:139-46 pubmed  publisher | 
| flow cytometry; human; fig 2
 | Theorell J, Bryceson Y. Analysis of Intracellular Ca(2+) Mobilization in Human NK Cell Subsets by Flow Cytometry. Methods Mol Biol. 2016;1441:117-30 pubmed  publisher | 
| flow cytometry; human; fig 2
 | Offersen R, Nissen S, Rasmussen T, Østergaard L, Denton P, Søgaard O, et al . A Novel Toll-Like Receptor 9 Agonist, MGN1703, Enhances HIV-1 Transcription and NK Cell-Mediated Inhibition of HIV-1-Infected Autologous CD4+ T Cells. J Virol. 2016;90:4441-4453 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 1a
 | Coughlan A, Harmon C, Whelan S, O Brien E, O Reilly V, Crotty P, et al . Myeloid Engraftment in Humanized Mice: Impact of Granulocyte-Colony Stimulating Factor Treatment and Transgenic Mouse Strain. Stem Cells Dev. 2016;25:530-41 pubmed  publisher | 
| flow cytometry; human; loading ...; fig 1a
 | Hülsmann J, Aubin H, Wehrmann A, Jenke A, Lichtenberg A, Akhyari P. Whole-Heart Construct Cultivation Under 3D Mechanical Stimulation of the Left Ventricle. Methods Mol Biol. 2016;1502:181-94 pubmed  publisher | 
| flow cytometry; rhesus macaque
 | Vierboom M, Breedveld E, Kap Y, Mary C, Poirier N, t Hart B, et al . Clinical efficacy of a new CD28-targeting antagonist of T cell co-stimulation in a non-human primate model of collagen-induced arthritis. Clin Exp Immunol. 2016;183:405-18 pubmed  publisher | 
|  | Rosario M, Liu B, Kong L, Collins L, Schneider S, Chen X, et al . The IL-15-Based ALT-803 Complex Enhances FcγRIIIa-Triggered NK Cell Responses and In Vivo Clearance of B Cell Lymphomas. Clin Cancer Res. 2016;22:596-608 pubmed  publisher | 
|  | Harshyne L, Nasca B, Kenyon L, Andrews D, Hooper D. Serum exosomes and cytokines promote a T-helper cell type 2 environment in the peripheral blood of glioblastoma patients. Neuro Oncol. 2016;18:206-15 pubmed  publisher | 
|  | Stenger E, Chiang K, Haight A, Qayed M, Kean L, Horan J. Use of Alefacept for Preconditioning in Multiply Transfused Pediatric Patients with Nonmalignant Diseases. Biol Blood Marrow Transplant. 2015;21:1845-52 pubmed  publisher | 
| flow cytometry; African green monkeyflow cytometry; human; fig s3
 | Metcalf Pate K, Pohlmeyer C, Walker Sperling V, Foote J, Najarro K, Cryer C, et al . A Murine Viral Outgrowth Assay to Detect Residual HIV Type 1 in Patients With Undetectable Viral Loads. J Infect Dis. 2015;212:1387-96 pubmed  publisher | 
|  | Zhou J, Amran F, Kramski M, Angelovich T, Elliott J, Hearps A, et al . An NK Cell Population Lacking FcRγ Is Expanded in Chronically Infected HIV Patients. J Immunol. 2015;194:4688-97 pubmed  publisher | 
| flow cytometry; human; tbl s2
 | Claiborne D, Prince J, Scully E, Macharia G, Micci L, Lawson B, et al . Replicative fitness of transmitted HIV-1 drives acute immune activation, proviral load in memory CD4+ T cells, and disease progression. Proc Natl Acad Sci U S A. 2015;112:E1480-9 pubmed  publisher | 
|  | Elliott G, Hong C, Xing X, Zhou X, Li D, Coarfa C, et al . Intermediate DNA methylation is a conserved signature of genome regulation. Nat Commun. 2015;6:6363 pubmed  publisher | 
|  | Gascard P, Bilenky M, Sigaroudinia M, Zhao J, Li L, Carles A, et al . Epigenetic and transcriptional determinants of the human breast. Nat Commun. 2015;6:6351 pubmed  publisher | 
|  | Johnson P, Challis R, Chowdhury F, Gao Y, Harvey M, Geldart T, et al . Clinical and biological effects of an agonist anti-CD40 antibody: a Cancer Research UK phase I study. Clin Cancer Res. 2015;21:1321-8 pubmed  publisher | 
|  | Weihrauch M, Richly H, von Bergwelt Baildon M, Becker H, Schmidt M, Hacker U, et al . Phase I clinical study of the toll-like receptor 9 agonist MGN1703 in patients with metastatic solid tumours. Eur J Cancer. 2015;51:146-56 pubmed  publisher | 
| flow cytometry; crab eating macaque
 | Bell C, Sun Y, Nowak U, Clark J, Howlett S, Pekalski M, et al . Sustained in vivo signaling by long-lived IL-2 induces prolonged increases of regulatory T cells. J Autoimmun. 2015;56:66-80 pubmed  publisher | 
|  | Lowdon R, Zhang B, Bilenky M, Mauro T, Li D, Gascard P, et al . Regulatory network decoded from epigenomes of surface ectoderm-derived cell types. Nat Commun. 2014;5:5442 pubmed  publisher | 
| flow cytometry; human; fig 1
 | Williams D, Anastos K, Morgello S, Berman J. JAM-A and ALCAM are therapeutic targets to inhibit diapedesis across the BBB of CD14+CD16+ monocytes in HIV-infected individuals. J Leukoc Biol. 2015;97:401-12 pubmed  publisher | 
| flow cytometry; human; 5 ug/ml
 | Vogelpoel L, Hansen I, Rispens T, Muller F, van Capel T, Turina M, et al . Fc gamma receptor-TLR cross-talk elicits pro-inflammatory cytokine production by human M2 macrophages. Nat Commun. 2014;5:5444 pubmed  publisher | 
| flow cytometry; human; fig 2
 | Rogacev K, Zawada A, Hundsdorfer J, Achenbach M, Held G, Fliser D, et al . Immunosuppression and monocyte subsets. Nephrol Dial Transplant. 2015;30:143-53 pubmed  publisher | 
|  | Balasa B, Yun R, Belmar N, Fox M, Chao D, Robbins M, et al . Elotuzumab enhances natural killer cell activation and myeloma cell killing through interleukin-2 and TNF-α pathways. Cancer Immunol Immunother. 2015;64:61-73 pubmed  publisher | 
|  | Lundholm M, Schröder M, Nagaeva O, Baranov V, Widmark A, Mincheva Nilsson L, et al . Prostate tumor-derived exosomes down-regulate NKG2D expression on natural killer cells and CD8+ T cells: mechanism of immune evasion. PLoS ONE. 2014;9:e108925 pubmed  publisher | 
|  | Landy J, Al Hassi H, Ronde E, English N, Mann E, Bernardo D, et al . Innate immune factors in the development and maintenance of pouchitis. Inflamm Bowel Dis. 2014;20:1942-9 pubmed  publisher | 
| immunocytochemistry; mouse
 | Yu J, Zuo Z, Zhang W, Yang Q, Zhang Y, Tang Y, et al . Identification of immunophenotypic subtypes with different prognoses in extranodal natural killer/T-cell lymphoma, nasal type. Hum Pathol. 2014;45:2255-62 pubmed  publisher | 
| flow cytometry; human; fig 4
 | Madhavi V, Ana Sosa Batiz F, Jegaskanda S, Center R, Winnall W, Parsons M, et al . Antibody-dependent effector functions against HIV decline in subjects receiving antiretroviral therapy. J Infect Dis. 2015;211:529-38 pubmed  publisher | 
|  | Davey M, Morgan M, Liuzzi A, Tyler C, Khan M, Szakmany T, et al . Microbe-specific unconventional T cells induce human neutrophil differentiation into antigen cross-presenting cells. J Immunol. 2014;193:3704-3716 pubmed  publisher | 
| flow cytometry; African green monkey; fig 2
 | Jacquelin B, Petitjean G, Kunkel D, Liovat A, Jochems S, Rogers K, et al . Innate immune responses and rapid control of inflammation in African green monkeys treated or not with interferon-alpha during primary SIVagm infection. PLoS Pathog. 2014;10:e1004241 pubmed  publisher | 
|  | Kubach J, Hubo M, Amendt C, Stroh C, Jonuleit H. IgG1 anti-epidermal growth factor receptor antibodies induce CD8-dependent antitumor activity. Int J Cancer. 2015;136:821-30 pubmed  publisher | 
| flow cytometry; rhesus macaque
 | Cartwright E, McGary C, Cervasi B, Micci L, Lawson B, Elliott S, et al . Divergent CD4+ T memory stem cell dynamics in pathogenic and nonpathogenic simian immunodeficiency virus infections. J Immunol. 2014;192:4666-73 pubmed  publisher | 
|  | Ito S, Bollard C, Carlsten M, Melenhorst J, Biancotto A, Wang E, et al . Ultra-low dose interleukin-2 promotes immune-modulating function of regulatory T cells and natural killer cells in healthy volunteers. Mol Ther. 2014;22:1388-1395 pubmed  publisher | 
| flow cytometry; chimpanzee
 | Hodara V, Parodi L, Chavez D, Smith L, Lanford R, Giavedoni L. Characterization of ??T cells in naïve and HIV-infected chimpanzees and their responses to T-cell activators in vitro. J Med Primatol. 2014;43:258-71 pubmed  publisher | 
| flow cytometry; African green monkey; loading ...; fig 10flow cytometry; human; loading ...; fig 10
 | Trist H, Tan P, Wines B, Ramsland P, Orlowski E, Stubbs J, et al . Polymorphisms and interspecies differences of the activating and inhibitory Fc?RII of Macaca nemestrina influence the binding of human IgG subclasses. J Immunol. 2014;192:792-803 pubmed  publisher | 
|  | Kyoizumi S, Kubo Y, Kajimura J, Yoshida K, Hayashi T, Nakachi K, et al . Fate Decision Between Group 3 Innate Lymphoid and Conventional NK Cell Lineages by Notch Signaling in Human Circulating Hematopoietic Progenitors. J Immunol. 2017;199:2777-2793 pubmed  publisher | 
|  | Zhang D, Goldberg M, Chiu M. Fc Engineering Approaches to Enhance the Agonism and Effector Functions of an Anti-OX40 Antibody. J Biol Chem. 2016;291:27134-27146 pubmed  publisher | 
|  | Xie M, Hong C, Zhang B, Lowdon R, Xing X, Li D, et al . DNA hypomethylation within specific transposable element families associates with tissue-specific enhancer landscape. Nat Genet. 2013;45:836-41 pubmed  publisher | 
|  | Maloveste S, Chen D, Gostick E, Vivian J, Plishka R, Iyengar R, et al . Degenerate recognition of MHC class I molecules with Bw4 and Bw6 motifs by a killer cell Ig-like receptor 3DL expressed by macaque NK cells. J Immunol. 2012;189:4338-48 pubmed  publisher | 
|  | Dhodapkar K, Banerjee D, Connolly J, Kukreja A, Matayeva E, Veri M, et al . Selective blockade of the inhibitory Fcgamma receptor (FcgammaRIIB) in human dendritic cells and monocytes induces a type I interferon response program. J Exp Med. 2007;204:1359-69 pubmed | 
|  | Ito T, Wang Y, Duramad O, Hori T, Delespesse G, Watanabe N, et al . TSLP-activated dendritic cells induce an inflammatory T helper type 2 cell response through OX40 ligand. J Exp Med. 2005;202:1213-23 pubmed | 
|  | Bryceson Y, March M, Barber D, Ljunggren H, Long E. Cytolytic granule polarization and degranulation controlled by different receptors in resting NK cells. J Exp Med. 2005;202:1001-12 pubmed | 
|  | Weller C, Collington S, Brown J, Miller H, Al Kashi A, Clark P, et al . Leukotriene B4, an activation product of mast cells, is a chemoattractant for their progenitors. J Exp Med. 2005;201:1961-71 pubmed | 
|  | Tong J, Allenspach E, Takahashi S, Mody P, Park C, Burkhardt J, et al . CD43 regulation of T cell activation is not through steric inhibition of T cell-APC interactions but through an intracellular mechanism. J Exp Med. 2004;199:1277-83 pubmed | 
|  | Carlin L, Eleme K, McCann F, Davis D. Intercellular transfer and supramolecular organization of human leukocyte antigen C at inhibitory natural killer cell immune synapses. J Exp Med. 2001;194:1507-17 pubmed | 
|  | Hoffmann P, deCathelineau A, Ogden C, Leverrier Y, Bratton D, Daleke D, et al . Phosphatidylserine (PS) induces PS receptor-mediated macropinocytosis and promotes clearance of apoptotic cells. J Cell Biol. 2001;155:649-59 pubmed |