This webpage contains legacy information. The product is either no longer available from the supplier or has been delisted at Labome.
product summary
company name :
Addgene
product type :
cDNA
product name :
pdCas9-DNMT3A-PuroR_hNT
catalog :
71830
citations: 1
Reference
Vojta A, Dobrinić P, Tadić V, Bočkor L, Korać P, Julg B, et al. Repurposing the CRISPR-Cas9 system for targeted DNA methylation. Nucleic Acids Res. 2016;44:5615-28 pubmed publisher
product information
Catalog Number :
71830
Product Name :
pdCas9-DNMT3A-PuroR_hNT
article :
doi10.1093/nar/gkw159
id18013
pubmed_id26969735
bacterial resistance :
Ampicillin
cloning :
backbonepdCas9-DNMT3A-PuroR
backbone_mutation
backbone_origin
backbone_size10134
promoter
sequencing_primer_3
sequencing_primer_5
vector_types
Mammalian Expression
CRISPR
growth notes :
The catalytic domain of human DNMT3A (amino acids P602-V912) was derived from the plasmid pcDNA3/Myc-DNMT3A (Addgene, plasmid #35521) (Chen et al., 2005, J Cell Biochem 95: 902-917). Undesired BbsI restriction site was removed by site-directed mutagenesis, without affecting the amino acid sequence. Plasmid pSpCas9n(BB)-2A-Puro (PX462) (Addgene, plasmid #48141) (Ran et al., 2013, Nat Protoc 8: 2281-2308) was used as a backbone. Additional H840A mutation was introduced into Cas9n D10A nickase. Human non-targeting sgRNA is cloned between BbsI restriction sites.
growth strain :
Expression of dCas9-DNMT3A fusion with T2A-PuroR and non-targeting control sgRNA for use in human cells
origin :
37
pi :
alt_names
dCas9-DNMT3A-PuroR_hNT
SpdCas9-DNMT3A-T2A-PuroR_hNT
dCas9-DNMT3A_hNT
cloning
clone_methodRestriction Enzyme
cloning_site_3BbsI
cloning_site_5BbsI
promoterU6
sequencing_primer_3
sequencing_primer_5GAGGGCCTATTTCCCATGATTCC
site_3_destroyed1
site_5_destroyed1
entrez_gene
aliasesDNMT3A2, HESJAS, M.HsaIIIA, TBRS
geneDNMT3A
id1788
genbank_ids
AKA60242.1
NP_072046.2
mutationD10A and H840A in S.pyogenes Cas9
nameNon-targeting sgRNA human
shRNA_sequenceNon-targeting
size5906
species
9606
Homo sapiens
100
Synthetic
32644
Other
S. pyogenes
tags
locationN terminal on insert
tag3xFLAG
locationN terminal on insert
tagSV40 NLS
locationC terminal on insert
tagT2A-PuroR
plasmid copy :
The plasmid is derived from Addgene plasmids #35521 and #48141.
resistance markers :
2660
tags :
Unknown
company information
Addgene
490 Arsenal Way, Suite 100
Watertown, MA 02472
info@addgene.org
https://www.addgene.org
617.225.9000
headquarters: USA