Szelenyi E, Navarrete J, Murry A, Zhang Y, Girven K, Kuo L, et al. An arginine-rich nuclear localization signal (ArgiNLS) strategy for streamlined image segmentation of single-cells. bioRxiv. 2023;: pubmed publisher

Bar xe3 o S, Xu Y, Vistein R, Goff L, Nielsen K, Bae B, et al. Transcriptional Control of Neocortical Size and Microcephaly. bioRxiv. 2023;: pubmed publisher

Chorghay Z, Li V, Schohl A, Ghosh A, Ruthazer E. The effects of the NMDAR co-agonist D-serine on the structure and function of optic tectal neurons in the developing visual system. Sci Rep. 2023;13:13383 pubmed publisher

Moore S, Nakamura T, Nie J, Solivais A, Aristiz xe1 bal Ram xed rez I, Ueda Y, et al. Generating high-fidelity cochlear organoids from human pluripotent stem cells. Cell Stem Cell. 2023;30:950-961.e7 pubmed publisher

Park P, Wong Campos D, Itkis D, Qi Y, Davis H, Grimm J, et al. Dendritic voltage imaging reveals biophysical basis of associative plasticity rules. bioRxiv. 2023;: pubmed publisher

Angelova A, Tiveron M, Loizeau M, Cremer H, Platel J. Effects of sensory deprivation on glomerular interneurons in the mouse olfactory bulb: differences in mortality and phenotypic adjustment of dopaminergic neurons. Front Cell Neurosci. 2023;17:1170170 pubmed publisher

Hutchison V, Lynch A, Gutierrez Gamez A, Chen J. An inducible tricolor reporter mouse for simultaneous imaging of lysosomes, mitochondria and microtubules. bioRxiv. 2023;: pubmed publisher

Galdos F, Lee C, Lee S, PAIGE S, Goodyer W, Xu S, et al. Combined lineage tracing and scRNA-seq reveals unexpected first heart field predominance of human iPSC differentiation. elife. 2023;12: pubmed publisher

Reinhard J, Porrello E, Lin S, Pelczar P, Previtali S, R xfc egg M. Nerve pathology is prevented by linker proteins in mouse models for LAMA2-related muscular dystrophy. PNAS Nexus. 2023;2:pgad083 pubmed publisher

Huang C, Lee K, Lin P, Nian F, Cheng H, Chang C, et al. Muscleblind-like 2 knockout shifts adducin 1 isoform expression and alters dendritic spine dynamics of cortical neurons during brain development. Neuropathol Appl Neurobiol. 2023;49:e12890 pubmed publisher

Alfonsa H, Burman R, Brodersen P, Newey S, Mahfooz K, Yamagata T, et al. Intracellular chloride regulation mediates local sleep pressure in the cortex. Nat Neurosci. 2022;: pubmed publisher

Kole K, Voesenek B, Brinia M, Petersen N, Kole M. Parvalbumin basket cell myelination accumulates axonal mitochondria to internodes. Nat Commun. 2022;13:7598 pubmed publisher

Riley V, Holmberg J, Sokolov A, Feliciano D. Tsc2 shapes olfactory bulb granule cell molecular and morphological characteristics. Front Mol Neurosci. 2022;15:970357 pubmed publisher

McHugh S, Lopes Dos Santos V, Gava G, Hartwich K, Tam S, Bannerman D, et al. Adult-born dentate granule cells promote hippocampal population sparsity. Nat Neurosci. 2022;25:1481-1491 pubmed publisher

Fan C, Kim D, An H, Park Y. Identifying an oligodendrocyte enhancer that regulates Olig2 expression. Hum Mol Genet. 2022;: pubmed publisher

Gupta S, Dovey O, Domingues A, Cyran O, Cash C, Giotopoulos G, et al. Transcriptional variability accelerates preleukemia by cell diversification and perturbation of protein synthesis. Sci Adv. 2022;8:eabn4886 pubmed publisher

Wakita S, Hara M, Kitabatake Y, Kawatani K, Kurahashi H, Hashizume R. Experimental method for haplotype phasing across the entire length of chromosome 21 in trisomy 21 cells using a chromosome elimination technique. J Hum Genet. 2022;: pubmed publisher

Yilmaz V, Louca P, Potamiti L, Panayiotidis M, Strati K. A novel lineage-tracing mouse model for studying early MmuPV1 infections. elife. 2022;11: pubmed publisher

Rakovic A, Voß D, Vulinović F, Meier B, Hellberg A, Nau C, et al. Electrophysiological Properties of Induced Pluripotent Stem Cell-Derived Midbrain Dopaminergic Neurons Correlate With Expression of Tyrosine Hydroxylase. Front Cell Neurosci. 2022;16:817198 pubmed publisher

Nørgård M, Steffensen L, Hansen D, Füchtbauer E, Engelund M, Dimke H, et al. A new transgene mouse model using an extravesicular EGFP tag enables affinity isolation of cell-specific extracellular vesicles. Sci Rep. 2022;12:496 pubmed publisher

Geiller T, Sadeh S, Rolotti S, Blockus H, Vancura B, Negrean A, et al. Local circuit amplification of spatial selectivity in the hippocampus. Nature. 2022;601:105-109 pubmed publisher

Zhang L, Getz S, Bordey A. Dual in Utero Electroporation in Mice to Manipulate Two Specific Neuronal Populations in the Developing Cortex. Front Bioeng Biotechnol. 2021;9:814638 pubmed publisher

Denoth Lippuner A, Jaeger B, Liang T, Royall L, Chie S, Buthey K, et al. Visualization of individual cell division history in complex tissues using iCOUNT. Cell Stem Cell. 2021;28:2020-2034.e12 pubmed publisher

Hsiao Y, Huang Y, Borah B, Chen S, Sun C. Single-laser-based simultaneous four-wavelength excitation source for femtosecond two-photon fluorescence microscopy. Biomed Opt Express. 2021;12:4661-4679 pubmed publisher

Mariani L, Guo X, Menezes N, Drozd A, Çakal S, Wang Q, et al. A TALE/HOX code unlocks WNT signalling response towards paraxial mesoderm. Nat Commun. 2021;12:5136 pubmed publisher

Panthi S, Schmitt P, Lorenz F, Stanfield B, Schmitt A. Paramyxovirus-Like Particles as Protein Delivery Vehicles. J Virol. 2021;95:e0103021 pubmed publisher

Kim D, An H, Fan C, Park Y. Identifying oligodendrocyte enhancers governing Plp1 expression. Hum Mol Genet. 2021;: pubmed publisher

Nagahama K, Fujino S, Watanabe T, Uesaka N, Kano M. Combining electrophysiology and optogenetics for functional screening of pyramidal neurons in the mouse prefrontal cortex. STAR Protoc. 2021;2:100469 pubmed publisher

van Heusden F, Macey Dare A, Gordon J, Krajeski R, Sharott A, Ellender T. Diversity in striatal synaptic circuits arises from distinct embryonic progenitor pools in the ventral telencephalon. Cell Rep. 2021;35:109041 pubmed publisher

Genolet O, Monaco A, Dunkel I, Boettcher M, Schulz E. Identification of X-chromosomal genes that drive sex differences in embryonic stem cells through a hierarchical CRISPR screening approach. Genome Biol. 2021;22:110 pubmed publisher

Benito Kwiecinski S, Giandomenico S, Sutcliffe M, Riis E, Freire Pritchett P, Kelava I, et al. An early cell shape transition drives evolutionary expansion of the human forebrain. Cell. 2021;184:2084-2102.e19 pubmed publisher

Brosh R, Laurent J, Ordoñez R, Huang E, Hogan M, Hitchcock A, et al. A versatile platform for locus-scale genome rewriting and verification. Proc Natl Acad Sci U S A. 2021;118: pubmed publisher

Li X, Liu G, Yang L, Li Z, Zhang Z, Xu Z, et al. Decoding Cortical Glial Cell Development. Neurosci Bull. 2021;37:440-460 pubmed publisher

Mattar P, Jolicoeur C, Dang T, Shah S, Clark B, Cayouette M. A Casz1-NuRD complex regulates temporal identity transitions in neural progenitors. Sci Rep. 2021;11:3858 pubmed publisher

Shibata A, Ueda H, Eto K, Onda M, Sato A, Ohba T, et al. Photoactivatable CaMKII induces synaptic plasticity in single synapses. Nat Commun. 2021;12:751 pubmed publisher

Wei W, Riley N, Yang A, Kim J, Terrell S, Li V, et al. Cell type-selective secretome profiling in vivo. Nat Chem Biol. 2020;: pubmed publisher

Schohl A, Chorghay Z, Ruthazer E. A Simple and Efficient Method for Visualizing Individual Cells in vivo by Cre-Mediated Single-Cell Labeling by Electroporation (CREMSCLE). Front Neural Circuits. 2020;14:47 pubmed publisher

Zhang Y, Liu G, Guo T, Liang X, Du H, Yang L, et al. Cortical Neural Stem Cell Lineage Progression Is Regulated by Extrinsic Signaling Molecule Sonic Hedgehog. Cell Rep. 2020;30:4490-4504.e4 pubmed publisher

Tang Y, Zuniga Hertz J, Han C, Yu B, Cai D. Multifaceted secretion of htNSC-derived hypothalamic islets induces survival and antidiabetic effect via peripheral implantation in mice. elife. 2020;9: pubmed publisher

Kubo S, Murata C, Okamura H, Sakasegawa T, Sakurai C, Hatsuzawa K, et al. Oct motif variants in Beckwith-Wiedemann syndrome patients disrupt maintenance of the hypomethylated state of the H19/IGF2 imprinting control region. FEBS Lett. 2020;594:1517-1531 pubmed publisher

Guo J, Otis J, Suciu S, Catalano C, Xing L, Constable S, et al. Primary Cilia Signaling Promotes Axonal Tract Development and Is Disrupted in Joubert Syndrome-Related Disorders Models. Dev Cell. 2019;51:759-774.e5 pubmed publisher

Atasoy M, Rohaim M, Munir M. Simultaneous Deletion of Virulence Factors and Insertion of Antigens into the Infectious Laryngotracheitis Virus Using NHEJ-CRISPR/Cas9 and Cre-Lox System for Construction of a Stable Vaccine Vector. Vaccines (Basel). 2019;7: pubmed publisher

Frade J, Nakagawa S, Cortes P, Di Vicino U, Romo N, Lluis F, et al. Controlled ploidy reduction of pluripotent 4n cells generates 2n cells during mouse embryo development. Sci Adv. 2019;5:eaax4199 pubmed publisher

De León Reyes N, Mederos S, Varela I, Weiss L, Perea G, Galazo M, et al. Transient callosal projections of L4 neurons are eliminated for the acquisition of local connectivity. Nat Commun. 2019;10:4549 pubmed publisher

Sun Y, Espinosa J, Hoseini M, Stryker M. Experience-dependent structural plasticity at pre- and postsynaptic sites of layer 2/3 cells in developing visual cortex. Proc Natl Acad Sci U S A. 2019;116:21812-21820 pubmed publisher

Lin B. Modulation of the PTEN/mTOR pathway to enhance survival of cone photoreceptors in retinal degeneration disorders. Hong Kong Med J. 2019;25 Suppl 5:44-47 pubmed

Kim D, An H, Shearer R, Sharif M, Fan C, Choi J, et al. A principled strategy for mapping enhancers to genes. Sci Rep. 2019;9:11043 pubmed publisher

Tang P, Alex A, Nie J, Lee J, Roth A, Booth K, et al. Defective Tmprss3-Associated Hair Cell Degeneration in Inner Ear Organoids. Stem Cell Reports. 2019;: pubmed publisher

Zhang M, Ergin V, Lin L, Stork C, Chen L, Zheng S. Axonogenesis Is Coordinated by Neuron-Specific Alternative Splicing Programming and Splicing Regulator PTBP2. Neuron. 2019;101:690-706.e10 pubmed publisher

Lin B, Xiong G, Yang W. Ribosomal protein S6 kinase 1 promotes the survival of photoreceptors in retinitis pigmentosa. Cell Death Dis. 2018;9:1141 pubmed publisher

Benito N, Gaborieau E, Sanz Diez A, Kosar S, Foucault L, Raineteau O, et al. A Pool of Postnatally Generated Interneurons Persists in an Immature Stage in the Olfactory Bulb. J Neurosci. 2018;38:9870-9882 pubmed publisher

Fan L, Nehme R, Adam Y, Jung E, Wu H, Eggan K, et al. All-optical synaptic electrophysiology probes mechanism of ketamine-induced disinhibition. Nat Methods. 2018;15:823-831 pubmed publisher

Zhang P, Lu H, Peixoto R, Pines M, Ge Y, Oku S, et al. Heparan Sulfate Organizes Neuronal Synapses through Neurexin Partnerships. Cell. 2018;174:1450-1464.e23 pubmed publisher

Messier J, Chen H, Cai Z, Xue M. Targeting light-gated chloride channels to neuronal somatodendritic domain reduces their excitatory effect in the axon. elife. 2018;7: pubmed publisher

Al Batran R, Gopal K, Martin M, Ho K, Almutairi M, Aburasayn H, et al. Skeletal muscle-specific Cre recombinase expression, controlled by the human α-skeletal actin promoter, improves glucose tolerance in mice fed a high-fat diet. Diabetologia. 2018;61:1849-1855 pubmed publisher

de Melo J, Clark B, Venkataraman A, Shiau F, Zibetti C, Blackshaw S. Ldb1- and Rnf12-dependent regulation of Lhx2 controls the relative balance between neurogenesis and gliogenesis in the retina. Development. 2018;145: pubmed publisher

Zhou J, Benito Martin A, Mighty J, Chang L, Ghoroghi S, Wu H, et al. Retinal progenitor cells release extracellular vesicles containing developmental transcription factors, microRNA and membrane proteins. Sci Rep. 2018;8:2823 pubmed publisher

Roh Johnson M, Shah A, Stonick J, Poudel K, Kargl J, Yang G, et al. Macrophage-Dependent Cytoplasmic Transfer during Melanoma Invasion In Vivo. Dev Cell. 2017;43:549-562.e6 pubmed publisher

Meyer P, Maity P, Burkovski A, Schwab J, Müssel C, Singh K, et al. A model of the onset of the senescence associated secretory phenotype after DNA damage induced senescence. PLoS Comput Biol. 2017;13:e1005741 pubmed publisher

Londono R, Wenzhong W, Wang B, Tuan R, Lozito T. Cartilage and Muscle Cell Fate and Origins during Lizard Tail Regeneration. Front Bioeng Biotechnol. 2017;5:70 pubmed publisher

Remez L, Onishi A, Menuchin Lasowski Y, Biran A, Blackshaw S, Wahlin K, et al. Pax6 is essential for the generation of late-born retinal neurons and for inhibition of photoreceptor-fate during late stages of retinogenesis. Dev Biol. 2017;432:140-150 pubmed publisher

Koehler K, Nie J, Longworth Mills E, Liu X, Lee J, Holt J, et al. Generation of inner ear organoids containing functional hair cells from human pluripotent stem cells. Nat Biotechnol. 2017;35:583-589 pubmed publisher

Azim K, Angonin D, Marcy G, Pieropan F, Rivera A, Donega V, et al. Pharmacogenomic identification of small molecules for lineage specific manipulation of subventricular zone germinal activity. PLoS Biol. 2017;15:e2000698 pubmed publisher

Briz C, Navarrete M, Esteban J, Nieto M. In Utero Electroporation Approaches to Study the Excitability of Neuronal Subpopulations and Single-cell Connectivity. J Vis Exp. 2017;: pubmed publisher

Kuwajima T, Soares C, Sitko A, Lefebvre V, Mason C. SoxC Transcription Factors Promote Contralateral Retinal Ganglion Cell Differentiation and Axon Guidance in the Mouse Visual System. Neuron. 2017;93:1110-1125.e5 pubmed publisher

Xu J, Yao G, Ru Y, Xie S. Expression of tamoxifen-inducible CRE recombinase in Lcn5-CreERT2 transgenic mouse caput epididymis. Mol Reprod Dev. 2017;84:257-264 pubmed publisher

Lou S, Adam Y, Weinstein E, Williams E, Williams K, Parot V, et al. Genetically Targeted All-Optical Electrophysiology with a Transgenic Cre-Dependent Optopatch Mouse. J Neurosci. 2016;36:11059-11073 pubmed

de Melo J, Clark B, Blackshaw S. Multiple intrinsic factors act in concert with Lhx2 to direct retinal gliogenesis. Sci Rep. 2016;6:32757 pubmed publisher

Al Soudy A, Nakanishi T, Mizuno S, Hasegawa Y, Shawki H, Katoh M, et al. Germline recombination in a novel Cre transgenic line, Prl3b1-Cre mouse. Genesis. 2016;54:389-97 pubmed publisher

Lopez C, Saud K, Aguilar R, Berndt F, Cánovas J, Montecino M, et al. The chromatin modifying complex CoREST/LSD1 negatively regulates notch pathway during cerebral cortex development. Dev Neurobiol. 2016;76:1360-1373 pubmed publisher

de Melo J, Zibetti C, Clark B, Hwang W, Miranda Angulo A, Qian J, et al. Lhx2 Is an Essential Factor for Retinal Gliogenesis and Notch Signaling. J Neurosci. 2016;36:2391-405 pubmed publisher

Yuan M, Gao X, Chard L, Ali Z, Ahmed J, Li Y, et al. A marker-free system for highly efficient construction of vaccinia virus vectors using CRISPR Cas9. Mol Ther Methods Clin Dev. 2015;2:15035 pubmed publisher

Chen Y, Cao J, Xiong M, Petersen A, Dong Y, Tao Y, et al. Engineering Human Stem Cell Lines with Inducible Gene Knockout using CRISPR/Cas9. Cell Stem Cell. 2015;17:233-44 pubmed publisher

Ochiai H, Sugawara T, Yamamoto T. Simultaneous live imaging of the transcription and nuclear position of specific genes. Nucleic Acids Res. 2015;43:e127 pubmed publisher

Xie C, Lu H, Nomura A, Hanse E, Forster C, Parker J, et al. Co-deleting Pten with Rb in retinal progenitor cells in mice results in fully penetrant bilateral retinoblastomas. Mol Cancer. 2015;14:93 pubmed publisher

Kearns N, Pham H, Tabak B, Genga R, Silverstein N, Garber M, et al. Functional annotation of native enhancers with a Cas9-histone demethylase fusion. Nat Methods. 2015;12:401-403 pubmed publisher

Ochiai H, Sugawara T, Sakuma T, Yamamoto T. Stochastic promoter activation affects Nanog expression variability in mouse embryonic stem cells. Sci Rep. 2014;4:7125 pubmed publisher

Xue M, Atallah B, Scanziani M. Equalizing excitation-inhibition ratios across visual cortical neurons. Nature. 2014;511:596-600 pubmed publisher

Zhao C, Farruggio A, Bjornson C, Chavez C, Geisinger J, Neal T, et al. Recombinase-mediated reprogramming and dystrophin gene addition in mdx mouse induced pluripotent stem cells. PLoS ONE. 2014;9:e96279 pubmed publisher

García Moreno F, Vasistha N, Begbie J, Molnar Z. CLoNe is a new method to target single progenitors and study their progeny in mouse and chick. Development. 2014;141:1589-98 pubmed publisher

Clarke S, Kang J, Ma D. The iFat1 transgene permits conditional endogenous n-3 PUFA enrichment both in vitro and in vivo. Transgenic Res. 2014;23:489-501 pubmed publisher

Azim K, Fischer B, Hurtado Chong A, Draganova K, Cantù C, Zemke M, et al. Persistent Wnt/β-catenin signaling determines dorsalization of the postnatal subventricular zone and neural stem cell specification into oligodendrocytes and glutamatergic neurons. Stem Cells. 2014;32:1301-12 pubmed publisher

Ageta Ishihara N, Miyata T, Ohshima C, Watanabe M, Sato Y, Hamamura Y, et al. Septins promote dendrite and axon development by negatively regulating microtubule stability via HDAC6-mediated deacetylation. Nat Commun. 2013;4:2532 pubmed publisher

Ryan S, Bonomo J, Zhao F, Cobb B. MHCII glycosylation modulates Bacteroides fragilis carbohydrate antigen presentation. J Exp Med. 2011;208:1041-53 pubmed publisher

Matsuda T, Cepko C. Controlled expression of transgenes introduced by in vivo electroporation. Proc Natl Acad Sci U S A. 2007;104:1027-32 pubmed