Published Application/Species/Sample/Dilution | Reference |
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- immunocytochemistry; mouse; 1:500; loading ...; fig 3a
| Guo Y, Manteiga J, Henninger J, Sabari B, Dall Agnese A, Hannett N, et al. Pol II phosphorylation regulates a switch between transcriptional and splicing condensates. Nature. 2019;572:543-548 pubmed publisher
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- ChIP-Seq; human; ; loading ...; fig 5a
| Mayfield J, Irani S, Escobar E, Zhang Z, Burkholder N, Robinson M, et al. Tyr1 phosphorylation promotes phosphorylation of Ser2 on the C-terminal domain of eukaryotic RNA polymerase II by P-TEFb. elife. 2019;8: pubmed publisher
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| Liu X, Wu H, Krzisch M, Wu X, Graef J, Muffat J, et al. Rescue of Fragile X Syndrome Neurons by DNA Methylation Editing of the FMR1 Gene. Cell. 2018;172:979-992.e6 pubmed publisher
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- immunocytochemistry; mouse; 1:200; loading ...; fig 1b
| Bogolyubova I, Bogolyubov D. Detection of RNA Polymerase II in Mouse Embryos During Zygotic Genome Activation Using Immunocytochemistry. Methods Mol Biol. 2017;1605:147-159 pubmed publisher
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- western blot; human; loading ...; fig 4b
| Aktas T, Avşar Ilık İ, Maticzka D, Bhardwaj V, Pessoa Rodrigues C, Mittler G, et al. DHX9 suppresses RNA processing defects originating from the Alu invasion of the human genome. Nature. 2017;544:115-119 pubmed publisher
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- chromatin immunoprecipitation; human; fig s5d
| Shadle S, Zhong J, Campbell A, Conerly M, Jagannathan S, Wong C, et al. DUX4-induced dsRNA and MYC mRNA stabilization activate apoptotic pathways in human cell models of facioscapulohumeral dystrophy. PLoS Genet. 2017;13:e1006658 pubmed publisher
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- chromatin immunoprecipitation; mouse; fig 4e
| Zhang Y, Zhang J, An W, Wan Y, Ma S, Yin J, et al. Intron 1 GATA site enhances ALAS2 expression indispensably during erythroid differentiation. Nucleic Acids Res. 2017;45:657-671 pubmed publisher
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- chromatin immunoprecipitation; human; fig 6
| Diamant G, Bahat A, Dikstein R. The elongation factor Spt5 facilitates transcription initiation for rapid induction of inflammatory-response genes. Nat Commun. 2016;7:11547 pubmed publisher
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- western blot; human; loading ...; fig 2d
| Lu L, Fan D, Hu C, Worth M, Ma Z, Jiang J. Distributive O-GlcNAcylation on the Highly Repetitive C-Terminal Domain of RNA Polymerase II. Biochemistry. 2016;55:1149-58 pubmed publisher
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- chromatin immunoprecipitation; human; fig 3
| M L, P P, T K, M P, E S, J P, et al. Essential role of HDAC6 in the regulation of PD-L1 in melanoma. Mol Oncol. 2016;10:735-750 pubmed publisher
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- chromatin immunoprecipitation; human; fig 4
| Kreuz S, Holmes K, Tooze R, Lefevre P. Loss of PIM2 enhances the anti-proliferative effect of the pan-PIM kinase inhibitor AZD1208 in non-Hodgkin lymphomas. Mol Cancer. 2015;14:205 pubmed publisher
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- ChIP-Seq; thale cress; fig s4a
| Zhai J, Bischof S, Wang H, Feng S, Lee T, Teng C, et al. A One Precursor One siRNA Model for Pol IV-Dependent siRNA Biogenesis. Cell. 2015;163:445-55 pubmed publisher
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- chromatin immunoprecipitation; human; fig 3d
| Zhu J, Sammons M, Donahue G, Dou Z, Vedadi M, Getlik M, et al. Gain-of-function p53 mutants co-opt chromatin pathways to drive cancer growth. Nature. 2015;525:206-11 pubmed publisher
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- ChIP-Seq; human; fig 6
- ChIP-Seq; fission yeast; fig 2
- western blot; fission yeast; 1:2000; fig s5
| Sutani T, Sakata T, Nakato R, Masuda K, Ishibashi M, Yamashita D, et al. Condensin targets and reduces unwound DNA structures associated with transcription in mitotic chromosome condensation. Nat Commun. 2015;6:7815 pubmed publisher
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- chromatin immunoprecipitation; human; fig 6
| Eid R, Demattei M, Episkopou H, Augé Gouillou C, Decottignies A, Grandin N, et al. Genetic Inactivation of ATRX Leads to a Decrease in the Amount of Telomeric Cohesin and Level of Telomere Transcription in Human Glioma Cells. Mol Cell Biol. 2015;35:2818-30 pubmed publisher
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- chromatin immunoprecipitation; human; loading ...; fig 4c
| Guendel I, Meltzer B, Baer A, Dever S, Valerie K, Guo J, et al. BRCA1 functions as a novel transcriptional cofactor in HIV-1 infection. Virol J. 2015;12:40 pubmed publisher
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- chromatin immunoprecipitation; human
| Jiang Y, Yan B, Lai W, Shi Y, Xiao D, Jia J, et al. Repression of Hox genes by LMP1 in nasopharyngeal carcinoma and modulation of glycolytic pathway genes by HoxC8. Oncogene. 2015;34:6079-91 pubmed publisher
|
- chromatin immunoprecipitation; fruit fly ; loading ...; fig 6c
- western blot; fruit fly ; 1:500; loading ...; fig 6b
| Dahlberg O, Shilkova O, Tang M, Holmqvist P, Mannervik M. P-TEFb, the super elongation complex and mediator regulate a subset of non-paused genes during early Drosophila embryo development. PLoS Genet. 2015;11:e1004971 pubmed publisher
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- chromatin immunoprecipitation; human
| Suzuki A, Makinoshima H, Wakaguri H, Esumi H, Sugano S, Kohno T, et al. Aberrant transcriptional regulations in cancers: genome, transcriptome and epigenome analysis of lung adenocarcinoma cell lines. Nucleic Acids Res. 2014;42:13557-72 pubmed publisher
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| Matsumoto K, Suzuki A, Wakaguri H, Sugano S, Suzuki Y. Construction of mate pair full-length cDNAs libraries and characterization of transcriptional start sites and termination sites. Nucleic Acids Res. 2014;42:e125 pubmed publisher
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- western blot; Saccharomycetales
| Schulz D, Pirkl N, Lehmann E, Cramer P. Rpb4 subunit functions mainly in mRNA synthesis by RNA polymerase II. J Biol Chem. 2014;289:17446-52 pubmed publisher
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- chromatin immunoprecipitation; mouse
| Seki M, Masaki H, Arauchi T, Nakauchi H, Sugano S, Suzuki Y. A comparison of the rest complex binding patterns in embryonic stem cells and epiblast stem cells. PLoS ONE. 2014;9:e95374 pubmed publisher
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- immunohistochemistry; thale cress; 1:100
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- chromatin immunoprecipitation; human
| Miao F, Chen Z, Zhang L, Wang J, Gao H, Wu X, et al. RNA-sequencing analysis of high glucose-treated monocytes reveals novel transcriptome signatures and associated epigenetic profiles. Physiol Genomics. 2013;45:287-99 pubmed publisher
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- chromatin immunoprecipitation; human
| Wu L, Runkle C, Jin H, Li J, Yang X, Kuzel T, et al. CCN3/NOV gene expression in human prostate cancer is directly suppressed by the androgen receptor. Oncogene. 2014;33:504-13 pubmed publisher
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- chromatin immunoprecipitation; human
- chromatin immunoprecipitation; mouse
| Estarás C, Fueyo R, Akizu N, Beltran S, Martínez Balbás M. RNA polymerase II progression through H3K27me3-enriched gene bodies requires JMJD3 histone demethylase. Mol Biol Cell. 2013;24:351-60 pubmed publisher
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- chromatin immunoprecipitation; mouse
| Zediak V, Johnnidis J, Wherry E, Berger S. Cutting edge: persistently open chromatin at effector gene loci in resting memory CD8+ T cells independent of transcriptional status. J Immunol. 2011;186:2705-9 pubmed publisher
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- chromatin immunoprecipitation; roundworm ; 2-5 ug
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| Su C, Lu F, Soldan S, Lamontagne R, Tang H, Napoletani G, et al. EBNA2 driven enhancer switching at the CIITA-DEXI locus suppresses HLA class II gene expression during EBV infection of B-lymphocytes. PLoS Pathog. 2021;17:e1009834 pubmed publisher
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| Shin S, Zhou H, He C, Wei Y, Wang Y, Shingu T, et al. Qki activates Srebp2-mediated cholesterol biosynthesis for maintenance of eye lens transparency. Nat Commun. 2021;12:3005 pubmed publisher
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| Estell C, Davidson L, Steketee P, Monier A, West S. ZC3H4 restricts non-coding transcription in human cells. elife. 2021;10: pubmed publisher
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| Castañeda A, Didychuk A, Louder R, McCollum C, Davis Z, Nogales E, et al. The gammaherpesviral TATA-box-binding protein directly interacts with the CTD of host RNA Pol II to direct late gene transcription. PLoS Pathog. 2020;16:e1008843 pubmed publisher
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| Zhou H, Møhlenberg M, Terczyńska Dyla E, Winther K, Hansen N, Vad Nielsen J, et al. The IFNL4 Gene Is a Noncanonical Interferon Gene with a Unique but Evolutionarily Conserved Regulation. J Virol. 2020;94: pubmed publisher
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