Fujimoto M, Takii R, Katiyar A, Srivastava P, Nakai A. Poly(ADP-Ribose) Polymerase 1 Promotes the Human Heat Shock Response by Facilitating Heat Shock Transcription Factor 1 Binding to DNA. Mol Cell Biol. 2018;38: pubmed publisher

Wu H, Gordon J, Whitfield T, Tai P, Van Wijnen A, Stein J, et al. Chromatin dynamics regulate mesenchymal stem cell lineage specification and differentiation to osteogenesis. Biochim Biophys Acta Gene Regul Mech. 2017;1860:438-449 pubmed publisher

Qiu Z, Elsayed Z, Peterkin V, Alkatib S, Bennett D, Landry J. Ino80 is essential for proximal-distal axis asymmetry in part by regulating Bmp4 expression. BMC Biol. 2016;14:18 pubmed publisher

Liu N, Avramova Z. Molecular mechanism of the priming by jasmonic acid of specific dehydration stress response genes in Arabidopsis. Epigenetics Chromatin. 2016;9:8 pubmed publisher

Veith N, Ziehr H, MacLeod R, Reamon Buettner S. Mechanisms underlying epigenetic and transcriptional heterogeneity in Chinese hamster ovary (CHO) cell lines. BMC Biotechnol. 2016;16:6 pubmed publisher

Tamaoki K, Okada R, Ishihara A, Shiojiri N, Mochizuki K, Goda T, et al. Morphological, biochemical, transcriptional and epigenetic responses to fasting and refeeding in intestine of Xenopus laevis. Cell Biosci. 2016;6:2 pubmed publisher

Grandy R, Whitfield T, Wu H, Fitzgerald M, VanOudenhove J, Zaidi S, et al. Genome-Wide Studies Reveal that H3K4me3 Modification in Bivalent Genes Is Dynamically Regulated during the Pluripotent Cell Cycle and Stabilized upon Differentiation. Mol Cell Biol. 2016;36:615-27 pubmed publisher

Peng D, Kryczek I, Nagarsheth N, Zhao L, Wei S, Wang W, et al. Epigenetic silencing of TH1-type chemokines shapes tumour immunity and immunotherapy. Nature. 2015;527:249-53 pubmed publisher

Lu S, Yang Y, Du Y, Cao L, Li M, Shen C, et al. The transcription factor c-Fos coordinates with histone lysine-specific demethylase 2A to activate the expression of cyclooxygenase-2. Oncotarget. 2015;6:34704-17 pubmed publisher

Gunes A, Iscan E, Topel H, Avci S, Gumustekin M, Erdal E, et al. Heparin treatment increases thioredoxin interacting protein expression in hepatocellular carcinoma cells. Int J Biochem Cell Biol. 2015;65:169-81 pubmed publisher

Takahashi J, Kumar V, Nakashe P, Koike N, Huang H, Green C, et al. ChIP-seq and RNA-seq methods to study circadian control of transcription in mammals. Methods Enzymol. 2015;551:285-321 pubmed publisher

Wijeweera A, Haj M, Feldman A, Pnueli L, Luo Z, Melamed P. Gonadotropin gene transcription is activated by menin-mediated effects on the chromatin. Biochim Biophys Acta. 2015;1849:328-41 pubmed publisher

de Oliveira S, Boudinot P, Calado Ã, Mulero V. Duox1-derived H2O2 modulates Cxcl8 expression and neutrophil recruitment via JNK/c-JUN/AP-1 signaling and chromatin modifications. J Immunol. 2015;194:1523-33 pubmed publisher

Karamitros D, Patmanidi A, Kotantaki P, Potocnik A, Bähr Ivacevic T, Benes V, et al. Geminin deletion increases the number of fetal hematopoietic stem cells by affecting the expression of key transcription factors. Development. 2015;142:70-81 pubmed publisher

Naik A, Hawwari A, Krangel M. Specification of Vδ and Vα usage by Tcra/Tcrd locus V gene segment promoters. J Immunol. 2015;194:790-4 pubmed publisher

Suzuki A, Makinoshima H, Wakaguri H, Esumi H, Sugano S, Kohno T, et al. Aberrant transcriptional regulations in cancers: genome, transcriptome and epigenome analysis of lung adenocarcinoma cell lines. Nucleic Acids Res. 2014;42:13557-72 pubmed publisher

Bakhtari A, Rahmani H, Bonakdar E, Jafarpour F, Asgari V, Hosseini S, et al. The interfering effects of superovulation and vitrification upon some important epigenetic biomarkers in mouse blastocyst. Cryobiology. 2014;69:419-27 pubmed publisher

Herranz D, Ambesi Impiombato A, Palomero T, Schnell S, Belver L, Wendorff A, et al. A NOTCH1-driven MYC enhancer promotes T cell development, transformation and acute lymphoblastic leukemia. Nat Med. 2014;20:1130-7 pubmed publisher

Matsumoto K, Suzuki A, Wakaguri H, Sugano S, Suzuki Y. Construction of mate pair full-length cDNAs libraries and characterization of transcriptional start sites and termination sites. Nucleic Acids Res. 2014;42:e125 pubmed publisher

Mungamuri S, Wang S, Manfredi J, Gu W, Aaronson S. Ash2L enables P53-dependent apoptosis by favoring stable transcription pre-initiation complex formation on its pro-apoptotic target promoters. Oncogene. 2015;34:2461-70 pubmed publisher

Tai P, Wu H, Gordon J, Whitfield T, Barutcu A, Van Wijnen A, et al. Epigenetic landscape during osteoblastogenesis defines a differentiation-dependent Runx2 promoter region. Gene. 2014;550:1-9 pubmed publisher

Seki M, Masaki H, Arauchi T, Nakauchi H, Sugano S, Suzuki Y. A comparison of the rest complex binding patterns in embryonic stem cells and epiblast stem cells. PLoS ONE. 2014;9:e95374 pubmed publisher

Maltby V, Martin B, Brind Amour J, Chruscicki A, McBurney K, Schulze J, et al. Histone H3K4 demethylation is negatively regulated by histone H3 acetylation in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A. 2012;109:18505-10 pubmed publisher

Makeyev A, Enkhmandakh B, Hong S, Joshi P, Shin D, Bayarsaihan D. Diversity and complexity in chromatin recognition by TFII-I transcription factors in pluripotent embryonic stem cells and embryonic tissues. PLoS ONE. 2012;7:e44443 pubmed publisher

Meng S, Shi H, Lin C, Wu Z, Lin F, Tao Z, et al. UvKmt2-Mediated H3K4 Trimethylation Is Required for Pathogenicity and Stress Response in Ustilaginoidea virens. J Fungi (Basel). 2022;8: pubmed publisher

Lemster A, Sievers E, Pasternack H, Lazar Karsten P, Klümper N, Sailer V, et al. Histone Demethylase KDM5C Drives Prostate Cancer Progression by Promoting EMT. Cancers (Basel). 2022;14: pubmed publisher

Meng S, Liu Z, Shi H, Wu Z, Qiu J, Wen H, et al. UvKmt6-mediated H3K27 trimethylation is required for development, pathogenicity, and stress response in Ustilaginoidea virens. Virulence. 2021;12:2972-2988 pubmed publisher

Du M, Gong P, Zhang Y, Liu Y, Liu X, Zhang F, et al. Histone methyltransferase SETD1A participates in lung cancer progression. Thorac Cancer. 2021;12:2247-2257 pubmed publisher

Ghasemi R, Struthers H, Wilson E, Spencer D. Contribution of CTCF binding to transcriptional activity at the HOXA locus in NPM1-mutant AML cells. Leukemia. 2021;35:404-416 pubmed publisher

Liu N, Yin Y, Wang H, Zhou Z, Sheng X, Fu H, et al. Telomere dysfunction impairs epidermal stem cell specification and differentiation by disrupting BMP/pSmad/P63 signaling. PLoS Genet. 2019;15:e1008368 pubmed publisher

Wang S, Zhang C, Hasson D, Desai A, SenBanerjee S, Magnani E, et al. Epigenetic Compensation Promotes Liver Regeneration. Dev Cell. 2019;: pubmed publisher

Vandenbon A, Kumagai Y, Lin M, Suzuki Y, Nakai K. Waves of chromatin modifications in mouse dendritic cells in response to LPS stimulation. Genome Biol. 2018;19:138 pubmed publisher

Strub T, Ghiraldini F, Carcamo S, Li M, Wroblewska A, Singh R, et al. SIRT6 haploinsufficiency induces BRAFV600E melanoma cell resistance to MAPK inhibitors via IGF signalling. Nat Commun. 2018;9:3440 pubmed publisher

Truong D, Boeke J. Resetting the Yeast Epigenome with Human Nucleosomes. Cell. 2017;171:1508-1519.e13 pubmed publisher

Duteil D, Tosic M, Willmann D, Georgiadi A, Kanouni T, Schüle R. Lsd1 prevents age-programed loss of beige adipocytes. Proc Natl Acad Sci U S A. 2017;114:5265-5270 pubmed publisher

Liu K, Mao J, Song L, Fan A, Zhang S, Wang J, et al. DNA repair and replication links to pluripotency and differentiation capacity of pig iPS cells. PLoS ONE. 2017;12:e0173047 pubmed publisher

Martin B, McBurney K, Maltby V, Jensen K, Brind Amour J, Howe L. Histone H3K4 and H3K36 Methylation Independently Recruit the NuA3 Histone Acetyltransferase in Saccharomyces cerevisiae. Genetics. 2017;205:1113-1123 pubmed publisher

Mendoza Parra M, Saravaki V, Cholley P, Blum M, Billoré B, Gronemeyer H. Antibody performance in ChIP-sequencing assays: From quality scores of public data sets to quantitative certification. F1000Res. 2016;5:54 pubmed publisher

Vaidya H, Rumph C, Katula K. Inactivation of the WNT5A Alternative Promoter B Is Associated with DNA Methylation and Histone Modification in Osteosarcoma Cell Lines U2OS and SaOS-2. PLoS ONE. 2016;11:e0151392 pubmed publisher

Messier T, Gordon J, Boyd J, Tye C, Browne G, Stein J, et al. Histone H3 lysine 4 acetylation and methylation dynamics define breast cancer subtypes. Oncotarget. 2016;7:5094-109 pubmed publisher

Bansal N, Petrie K, Christova R, Chung C, Leibovitch B, Howell L, et al. Targeting the SIN3A-PF1 interaction inhibits epithelial to mesenchymal transition and maintenance of a stem cell phenotype in triple negative breast cancer. Oncotarget. 2015;6:34087-105 pubmed publisher

Singh A, Sun Y, Li L, Zhang W, Wu T, Zhao S, et al. Cell-Cycle Control of Bivalent Epigenetic Domains Regulates the Exit from Pluripotency. Stem Cell Reports. 2015;5:323-36 pubmed publisher

Trombly D, Whitfield T, Padmanabhan S, Gordon J, Lian J, Van Wijnen A, et al. Genome-wide co-occupancy of AML1-ETO and N-CoR defines the t(8;21) AML signature in leukemic cells. BMC Genomics. 2015;16:309 pubmed publisher

Maekawa S, Imamachi N, Irie T, Tani H, Matsumoto K, Mizutani R, et al. Analysis of RNA decay factor mediated RNA stability contributions on RNA abundance. BMC Genomics. 2015;16:154 pubmed publisher

Sosa M, Parikh F, Maia A, Estrada Y, Bosch A, Bragado P, et al. NR2F1 controls tumour cell dormancy via SOX9- and RARβ-driven quiescence programmes. Nat Commun. 2015;6:6170 pubmed publisher

Müller Kuller U, Ackermann M, Kolodziej S, Brendel C, Fritsch J, Lachmann N, et al. A minimal ubiquitous chromatin opening element (UCOE) effectively prevents silencing of juxtaposed heterologous promoters by epigenetic remodeling in multipotent and pluripotent stem cells. Nucleic Acids Res. 2015;43:1577-92 pubmed publisher

Duarte L, Young A, Wang Z, Wu H, Panda T, Kou Y, et al. Histone H3.3 and its proteolytically processed form drive a cellular senescence programme. Nat Commun. 2014;5:5210 pubmed publisher

Papazyan R, Voronina E, Chapman J, Luperchio T, Gilbert T, Meier E, et al. Methylation of histone H3K23 blocks DNA damage in pericentric heterochromatin during meiosis. elife. 2014;3:e02996 pubmed publisher

Meyer M, Benkusky N, Lee C, Pike J. Genomic determinants of gene regulation by 1,25-dihydroxyvitamin D3 during osteoblast-lineage cell differentiation. J Biol Chem. 2014;289:19539-54 pubmed publisher

St John H, Bishop K, Meyer M, Benkusky N, Leng N, Kendziorski C, et al. The osteoblast to osteocyte transition: epigenetic changes and response to the vitamin D3 hormone. Mol Endocrinol. 2014;28:1150-65 pubmed publisher

Kolodziej S, Kuvardina O, Oellerich T, Herglotz J, Backert I, Kohrs N, et al. PADI4 acts as a coactivator of Tal1 by counteracting repressive histone arginine methylation. Nat Commun. 2014;5:3995 pubmed publisher

Yang X, Hegde V, Rao R, Zhang J, Nagarkatti P, Nagarkatti M. Histone modifications are associated with ?9-tetrahydrocannabinol-mediated alterations in antigen-specific T cell responses. J Biol Chem. 2014;289:18707-18 pubmed publisher

Meyer M, Benkusky N, Pike J. The RUNX2 cistrome in osteoblasts: characterization, down-regulation following differentiation, and relationship to gene expression. J Biol Chem. 2014;289:16016-31 pubmed publisher

Liu N, Ding Y, Fromm M, Avramova Z. Different gene-specific mechanisms determine the 'revised-response' memory transcription patterns of a subset of A. thaliana dehydration stress responding genes. Nucleic Acids Res. 2014;42:5556-66 pubmed publisher

Goeman F, De Nicola F, D Onorio De Meo P, Pallocca M, Elmi B, Castrignanò T, et al. VDR primary targets by genome-wide transcriptional profiling. J Steroid Biochem Mol Biol. 2014;143:348-56 pubmed publisher

Hackermüller J, Reiche K, Otto C, Hösler N, Blumert C, Brocke Heidrich K, et al. Cell cycle, oncogenic and tumor suppressor pathways regulate numerous long and macro non-protein-coding RNAs. Genome Biol. 2014;15:R48 pubmed publisher

Hauser J, Grundström C, Grundström T. Allelic exclusion of IgH through inhibition of E2A in a VDJ recombination complex. J Immunol. 2014;192:2460-70 pubmed publisher

Min H, Lee J, Kim M. Hoxc gene collinear expression and epigenetic modifications established during embryogenesis are maintained until after birth. Int J Biol Sci. 2013;9:960-5 pubmed publisher

Wang T, Nandakumar V, Jiang X, Jones L, Yang A, Huang X, et al. The control of hematopoietic stem cell maintenance, self-renewal, and differentiation by Mysm1-mediated epigenetic regulation. Blood. 2013;122:2812-22 pubmed publisher

Nosaka M, Ono A, Ishiwata A, Shimizu Sato S, Ishimoto K, Noda Y, et al. Expression of the rice microRNA miR820 is associated with epigenetic modifications at its own locus. Genes Genet Syst. 2013;88:105-12 pubmed

Schnerch A, Rampalii S, Bhatia M. Histone modification profiling in normal and transformed human embryonic stem cells using micro chromatin immunoprecipitation, scalable to genome-wide microarray analyses. Methods Mol Biol. 2013;1029:149-61 pubmed publisher

Pang B, Qiao X, Janssen L, Velds A, Groothuis T, Kerkhoven R, et al. Drug-induced histone eviction from open chromatin contributes to the chemotherapeutic effects of doxorubicin. Nat Commun. 2013;4:1908 pubmed publisher

Vo T, Revesz A, Sohi G, Ma N, Hardy D. Maternal protein restriction leads to enhanced hepatic gluconeogenic gene expression in adult male rat offspring due to impaired expression of the liver X receptor. J Endocrinol. 2013;218:85-97 pubmed publisher

Xiong Z, LaDana C, Wu D, Cao K. An inhibitory role of progerin in the gene induction network of adipocyte differentiation from iPS cells. Aging (Albany NY). 2013;5:288-303 pubmed

Light W, Freaney J, Sood V, Thompson A, D Urso A, Horvath C, et al. A conserved role for human Nup98 in altering chromatin structure and promoting epigenetic transcriptional memory. PLoS Biol. 2013;11:e1001524 pubmed publisher

Bevington S, Boyes J. Transcription-coupled eviction of histones H2A/H2B governs V(D)J recombination. EMBO J. 2013;32:1381-92 pubmed publisher

Deplus R, Delatte B, Schwinn M, Defrance M, Méndez J, Murphy N, et al. TET2 and TET3 regulate GlcNAcylation and H3K4 methylation through OGT and SET1/COMPASS. EMBO J. 2013;32:645-55 pubmed publisher

Moison C, Senamaud Beaufort C, Fourrière L, Champion C, Ceccaldi A, Lacomme S, et al. DNA methylation associated with polycomb repression in retinoic acid receptor ? silencing. FASEB J. 2013;27:1468-78 pubmed publisher

Zuo B, Yang J, Wang F, Wang L, Yin Y, Dan J, et al. Influences of lamin A levels on induction of pluripotent stem cells. Biol Open. 2012;1:1118-27 pubmed publisher

Goula A, Styś A, Chan J, Trottier Y, Festenstein R, Merienne K. Transcription elongation and tissue-specific somatic CAG instability. PLoS Genet. 2012;8:e1003051 pubmed publisher

Boedi S, Reyes Dominguez Y, Strauss J. Chromatin immunoprecipitation analysis in filamentous fungi. Methods Mol Biol. 2012;944:221-36 pubmed publisher

Shpargel K, Sengoku T, Yokoyama S, Magnuson T. UTX and UTY demonstrate histone demethylase-independent function in mouse embryonic development. PLoS Genet. 2012;8:e1002964 pubmed publisher

Bernardino L, Eiriz M, Santos T, Xapelli S, Grade S, Rosa A, et al. Histamine stimulates neurogenesis in the rodent subventricular zone. Stem Cells. 2012;30:773-84 pubmed publisher

Medina R, Ghule P, Cruzat F, Barutcu A, Montecino M, Stein J, et al. Epigenetic control of cell cycle-dependent histone gene expression is a principal component of the abbreviated pluripotent cell cycle. Mol Cell Biol. 2012;32:3860-71 pubmed publisher

Janzer A, Stamm K, Becker A, Zimmer A, Buettner R, Kirfel J. The H3K4me3 histone demethylase Fbxl10 is a regulator of chemokine expression, cellular morphology, and the metabolome of fibroblasts. J Biol Chem. 2012;287:30984-92 pubmed publisher

Rodríguez Esparragón F, Serna Gómez J, Hernández Velázquez E, Buset Ríos N, Hernández Trujillo Y, Garcia Bello M, et al. Homocysteinylated protein levels in internal mammary artery (IMA) fragments and its genotype-dependence. S-homocysteine-induced methylation modifications in IMA and aortic fragments. Mol Cell Biochem. 2012;369:235-46 pubmed publisher

Maltby V, Martin B, Schulze J, Johnson I, Hentrich T, Sharma A, et al. Histone H3 lysine 36 methylation targets the Isw1b remodeling complex to chromatin. Mol Cell Biol. 2012;32:3479-85 pubmed publisher

Reamon Buettner S, Borlak J. Dissecting epigenetic silencing complexity in the mouse lung cancer suppressor gene Cadm1. PLoS ONE. 2012;7:e38531 pubmed publisher

Nohara K, Tateishi Y, Suzuki T, Okamura K, Murai H, Takumi S, et al. Late-onset increases in oxidative stress and other tumorigenic activities and tumors with a Ha-ras mutation in the liver of adult male C3H mice gestationally exposed to arsenic. Toxicol Sci. 2012;129:293-304 pubmed publisher

Tyan S, Hsu C, Peng K, Chen C, Kuo W, Lee E, et al. Breast cancer cells induce stromal fibroblasts to secrete ADAMTS1 for cancer invasion through an epigenetic change. PLoS ONE. 2012;7:e35128 pubmed publisher

Peach S, Rudomin E, Udeshi N, Carr S, Jaffe J. Quantitative assessment of chromatin immunoprecipitation grade antibodies directed against histone modifications reveals patterns of co-occurring marks on histone protein molecules. Mol Cell Proteomics. 2012;11:128-37 pubmed publisher

Youn M, Yokoyama A, Fujiyama Nakamura S, Ohtake F, Minehata K, Yasuda H, et al. JMJD5, a Jumonji C (JmjC) domain-containing protein, negatively regulates osteoclastogenesis by facilitating NFATc1 protein degradation. J Biol Chem. 2012;287:12994-3004 pubmed publisher

Nijwening J, Geutjes E, Bernards R, Beijersbergen R. The histone demethylase Jarid1b (Kdm5b) is a novel component of the Rb pathway and associates with E2f-target genes in MEFs during senescence. PLoS ONE. 2011;6:e25235 pubmed publisher

Emanuele M, Costa S, Ragusa M, Gianguzza F. Chromatin dynamics of the developmentally regulated P. lividus neural alpha tubulin gene. Int J Dev Biol. 2011;55:591-6 pubmed publisher

Nakamura T, Nakagawa M, Ichisaka T, Shiota A, Yamanaka S. Essential roles of ECAT15-2/Dppa2 in functional lung development. Mol Cell Biol. 2011;31:4366-78 pubmed publisher

Li W, Liu H, Cheng Z, Su Y, Han H, Zhang Y, et al. DNA methylation and histone modifications regulate de novo shoot regeneration in Arabidopsis by modulating WUSCHEL expression and auxin signaling. PLoS Genet. 2011;7:e1002243 pubmed publisher

Wakabayashi Y, Tamiya T, Takada I, Fukaya T, Sugiyama Y, Inoue N, et al. Histone 3 lysine 9 (H3K9) methyltransferase recruitment to the interleukin-2 (IL-2) promoter is a mechanism of suppression of IL-2 transcription by the transforming growth factor-?-Smad pathway. J Biol Chem. 2011;286:35456-65 pubmed publisher

Sacilotto N, Espert A, Castillo J, Franco L, López Rodas G. Epigenetic transcriptional regulation of the growth arrest-specific gene 1 (Gas1) in hepatic cell proliferation at mononucleosomal resolution. PLoS ONE. 2011;6:e23318 pubmed publisher

Kanai A, Suzuki K, Tanimoto K, Mizushima Sugano J, Suzuki Y, Sugano S. Characterization of STAT6 target genes in human B cells and lung epithelial cells. DNA Res. 2011;18:379-92 pubmed publisher

Watanabe K, Emoto N, Hamano E, Sunohara M, Kawakami M, Kage H, et al. Genome structure-based screening identified epigenetically silenced microRNA associated with invasiveness in non-small-cell lung cancer. Int J Cancer. 2012;130:2580-90 pubmed publisher

Liu X, Wang J, Li R, Yang X, Sun Q, Albrecht E, et al. Maternal dietary protein affects transcriptional regulation of myostatin gene distinctively at weaning and finishing stages in skeletal muscle of Meishan pigs. Epigenetics. 2011;6:899-907 pubmed

Yamasaki S, Oda M, Daimon H, Mitsukuri K, Johkan M, Nakatsuka T, et al. Epigenetic modifications of the 35S promoter in cultured gentian cells. Plant Sci. 2011;180:612-9 pubmed publisher

Yamashita R, Sathira N, Kanai A, Tanimoto K, Arauchi T, Tanaka Y, et al. Genome-wide characterization of transcriptional start sites in humans by integrative transcriptome analysis. Genome Res. 2011;21:775-89 pubmed publisher

Stratmann A, Haendler B. The histone demethylase JARID1A regulates progesterone receptor expression. FEBS J. 2011;278:1458-69 pubmed publisher

Vargova K, Curik N, Burda P, Basova P, Kulvait V, Pospisil V, et al. MYB transcriptionally regulates the miR-155 host gene in chronic lymphocytic leukemia. Blood. 2011;117:3816-25 pubmed publisher

Fuchs S, Krajewski K, Baker R, Miller V, Strahl B. Influence of combinatorial histone modifications on antibody and effector protein recognition. Curr Biol. 2011;21:53-8 pubmed publisher

Chakravarthy H, Ormsbee B, Mallanna S, Rizzino A. Rapid activation of the bivalent gene Sox21 requires displacement of multiple layers of gene-silencing machinery. FASEB J. 2011;25:206-18 pubmed publisher

LaPlant Q, Vialou V, Covington H, Dumitriu D, Feng J, Warren B, et al. Dnmt3a regulates emotional behavior and spine plasticity in the nucleus accumbens. Nat Neurosci. 2010;13:1137-43 pubmed publisher

Sanders Y, Tollefsbol T, Varisco B, Hagood J. Epigenetic regulation of thy-1 by histone deacetylase inhibitor in rat lung fibroblasts. Am J Respir Cell Mol Biol. 2011;45:16-23 pubmed publisher

Shahhoseini M, Taei A, Mehrjardi N, Salekdeh G, Baharvand H. Epigenetic analysis of human embryonic carcinoma cells during retinoic acid-induced neural differentiation. Biochem Cell Biol. 2010;88:527-38 pubmed publisher

Philipot O, Joliot V, Ait Mohamed O, Pellentz C, Robin P, Fritsch L, et al. The core binding factor CBF negatively regulates skeletal muscle terminal differentiation. PLoS ONE. 2010;5:e9425 pubmed publisher

Venkatarama T, Lai F, Luo X, Zhou Y, Newman K, King M. Repression of zygotic gene expression in the Xenopus germline. Development. 2010;137:651-60 pubmed publisher

Anelli V, Santoriello C, Distel M, Köster R, Ciccarelli F, Mione M. Global repression of cancer gene expression in a zebrafish model of melanoma is linked to epigenetic regulation. Zebrafish. 2009;6:417-24 pubmed publisher

Kusakabe M, Watanabe K, Emoto N, Aki N, Kage H, Nagase T, et al. Impact of DNA demethylation of the G0S2 gene on the transcription of G0S2 in squamous lung cancer cell lines with or without nuclear receptor agonists. Biochem Biophys Res Commun. 2009;390:1283-7 pubmed publisher

Takahashi A, Obata Y, Fukumoto Y, Nakayama Y, Kasahara K, Kuga T, et al. Nuclear localization of Src-family tyrosine kinases is required for growth factor-induced euchromatinization. Exp Cell Res. 2009;315:1117-41 pubmed publisher

Kim J, Ebersole T, Kouprina N, Noskov V, Ohzeki J, Masumoto H, et al. Human gamma-satellite DNA maintains open chromatin structure and protects a transgene from epigenetic silencing. Genome Res. 2009;19:533-44 pubmed publisher

Pan Q, Wu Y, Lin T, Yao H, Yang Z, Gao G, et al. Bone morphogenetic protein-2 induces chromatin remodeling and modification at the proximal promoter of Sox9 gene. Biochem Biophys Res Commun. 2009;379:356-61 pubmed publisher

Noer A, Lindeman L, Collas P. Histone H3 modifications associated with differentiation and long-term culture of mesenchymal adipose stem cells. Stem Cells Dev. 2009;18:725-36 pubmed publisher

Masaki H, Nishida T, Kitajima S, Asahina K, Teraoka H. Developmental pluripotency-associated 4 (DPPA4) localized in active chromatin inhibits mouse embryonic stem cell differentiation into a primitive ectoderm lineage. J Biol Chem. 2007;282:33034-42 pubmed